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ankyrin_repeat_family_protein
Euk-VirFlamingopox_virus_FGPVKD09
ankyrin_repeat_family_protein__YP_009447929__Flamingopox_virus_FGPVKD09__2059380
Identity
- Accession:
- YP_009447929 ↗
- Protein ID:
- ankyrin_repeat_family_protein
- Kingdom:
- euk
Quality
87.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Avipoxvirus›
Flamingopox_virus_FGPVKD09
TaxID: 2059380
Cluster
View cluster (86 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 221-326
Domain cluster:
rep: ankyrin_repeat_protein__YP_009046215__Penguinpox_virus__648998__D344-440
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09372.16 best | PRANC | 57.1 | 2.60e-15 | 95.3% | 97.9% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 33.0 | 3.84e-01 | 75.5% | 66.2% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.65 | 54.0 | 5.07e-01 | 90.6% | 89.3% |
| 2yn7A00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.61 | 45.0 | 3.58e-01 | 78.3% | 65.9% |
| 4hteA01 | 1.20.58.1730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 42.0 | 3.88e-01 | 75.5% | 62.9% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 39.0 | 3.78e-01 | 72.6% | 74.6% |
| 4ymuD00 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.54 | 41.0 | 3.35e-01 | 81.1% | 55.3% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.54 | 44.0 | 4.26e-01 | 86.8% | 89.7% |
| 3pm0A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 46.0 | 3.05e-01 | 98.1% | 88.9% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 42.0 | 3.51e-01 | 84.0% | 88.4% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 39.0 | 3.86e-01 | 77.4% | 80.7% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.52 | 39.0 | 2.98e-01 | 80.2% | 47.8% |
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 33.0 | 3.70e-01 | 85.8% | 87.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4017411 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.61 | 46.0 | 4.10e-01 | 79.2% | 89.3% |
| 3934593 | 4163.1.2.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like | 0.60 | 43.0 | 4.31e-01 | 81.1% | 71.8% |
| 3841317 | 605.1.1.337 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TRP_2 | 0.60 | 43.0 | 4.18e-01 | 75.5% | 93.3% |
| 3370725 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.57 | 43.0 | 3.79e-01 | 78.3% | 69.7% |
| 4947819 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 43.0 | 3.58e-01 | 80.2% | 73.3% |
| 3280348 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 39.0 | 3.20e-01 | 70.8% | 83.5% |
| 4003906 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.56 | 46.0 | 4.29e-01 | 86.8% | 86.2% |
| 4034281 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 42.0 | 4.15e-01 | 79.2% | 86.4% |
| 3612295 | 7532.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate kinase domain 1 › Phosphoglycerate kinase domain 1 › Phosphoglycerate kinase domain 1 › PGK | 0.55 | 38.0 | 2.90e-01 | 76.4% | 29.2% |
| 3736105 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 40.0 | 2.94e-01 | 76.4% | 79.3% |
| 4559893 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.54 | 38.0 | 2.44e-01 | 73.6% | 24.5% |
| 3780367 | 109.4.1.811 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4800 | 0.53 | 45.0 | 3.02e-01 | 91.5% | 64.6% |
| 3089539 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.53 | 43.0 | 3.17e-01 | 87.7% | 79.0% |
| 3659606 | 3361.1.1.5 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › PF28983 | 0.53 | 40.0 | 3.97e-01 | 81.1% | 87.0% |
| 3516779 | 601.15.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Proteasome activator reg(alpha) › Proteasome activator reg(alpha) | 0.53 | 44.0 | 3.41e-01 | 87.7% | 74.9% |
D2
medium
residues 1-137
Domain cluster:
rep: MN180249.1__QHJ75400.1__X__00002__D85-208
Pfam (10)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12796.14 best | Ank_2 | 64.5 | 1.50e-17 | 67.9% | 91.1% |
| PF12796.14 | Ank_2 | 34.5 | 3.50e-08 | 47.4% | 66.7% |
| PF13857.13 | Ank_5 | 36.5 | 6.70e-09 | 40.2% | 91.1% |
| PF13637.13 | Ank_4 | 30.1 | 6.20e-07 | 38.0% | 88.0% |
| PF13637.13 | Ank_4 | 40.7 | 2.90e-10 | 36.5% | 100.0% |
| PF13637.13 | Ank_4 | 24.8 | 2.90e-05 | 32.9% | 86.0% |
| PF00023.37 | Ank | 31.0 | 3.00e-07 | 24.1% | 87.9% |
| PF00023.37 | Ank | 29.4 | 9.40e-07 | 24.1% | 100.0% |
| PF13606.13 | Ank_3 | 25.8 | 1.20e-05 | 21.9% | 90.3% |
| PF13606.13 | Ank_3 | 19.3 | 1.70e-03 | 21.2% | 96.8% |
D3
medium
residues 138-220
Domain cluster:
rep: ankyrin_repeat_protein__YP_009046255__Pigeonpox_virus__10264__D138-220