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ankyrin_repeat_protein

Euk-Vir

Acanthamoeba_polyphaga_moumouvirus

ankyrin_repeat_protein__YP_007354072__Acanthamoeba_polyphaga_moumouvirus__1269028

Identity

Accession:
YP_007354072 ↗
Protein ID:
ankyrin_repeat_protein
Kingdom:
euk

Quality

92.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-118
PDB
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF12796.14 best Ank_2 43.4 5.90e-11 50.8% 63.3%
PF13637.13 Ank_4 33.7 4.50e-08 39.8% 98.0%
PF00023.37 Ank 26.5 7.80e-06 28.0% 87.9%
PF13606.13 Ank_3 23.4 7.70e-05 25.4% 93.5%
D2 medium residues 119-185
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF12796.14 best Ank_2 31.3 3.50e-07 85.1% 60.0%
PF13637.13 Ank_4 28.8 1.60e-06 76.1% 92.0%
PF00023.37 Ank 14.8 4.20e-02 46.3% 57.6%
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ajaA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.90 84.0 5.14e-01 100.0% 22.4%
7xceA01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 82.0 5.37e-01 100.0% 31.1%
3eu9C00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 81.0 5.44e-01 100.0% 34.1%
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 81.0 5.46e-01 100.0% 33.9%
4cymD00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 82.0 5.91e-01 100.0% 45.5%
4hi8A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 81.0 5.85e-01 100.0% 45.9%
1ihbA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 81.0 5.97e-01 100.0% 50.0%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 80.0 6.41e-01 100.0% 61.8%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 80.0 5.03e-01 100.0% 26.6%
2rfmB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 80.0 5.66e-01 100.0% 41.8%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 78.0 6.81e-01 98.5% 73.2%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 67.0 6.89e-01 83.6% 90.8%
1k1aA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 79.0 5.32e-01 100.0% 34.2%
3uxgA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 78.0 5.77e-01 100.0% 46.6%
1ympA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 78.0 6.14e-01 100.0% 58.0%
6if3A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 78.0 5.79e-01 100.0% 49.7%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 79.0 5.30e-01 100.0% 33.5%
3twqA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 78.0 5.70e-01 100.0% 47.6%
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 77.0 4.94e-01 100.0% 26.0%
5aarA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 78.0 5.49e-01 100.0% 48.6%
2fo1E00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 77.0 4.88e-01 100.0% 30.0%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 77.0 5.94e-01 100.0% 59.1%
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 77.0 5.38e-01 100.0% 40.9%
1n11A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 77.0 4.62e-01 100.0% 18.8%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 76.0 5.76e-01 100.0% 60.0%
3ljnA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 76.0 4.83e-01 100.0% 23.4%
1qymA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 75.0 5.13e-01 100.0% 34.1%
2dznA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 75.0 5.11e-01 100.0% 34.5%
6ghmC01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 75.0 5.91e-01 100.0% 58.2%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 74.0 4.91e-01 100.0% 32.2%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 72.0 6.00e-01 100.0% 66.4%
2pbeA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.65 44.0 3.60e-01 70.1% 93.7%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.65 52.0 4.93e-01 86.6% 93.6%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.64 53.0 4.67e-01 92.5% 86.0%
2af7D00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.63 46.0 3.78e-01 76.1% 51.2%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 43.0 3.93e-01 76.1% 61.7%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.57 47.0 3.89e-01 94.0% 79.2%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 47.0 3.51e-01 100.0% 78.0%
1wzaA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 46.0 3.00e-01 97.0% 58.8%
2r5sA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 45.0 4.26e-01 100.0% 88.6%
3t69A02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.50 42.0 3.00e-01 98.5% 74.8%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4891160 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.88 69.0 7.38e-01 82.1% 98.3%
3616596 109.3.1.163 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.88 81.0 5.93e-01 98.5% 45.0%
3853124 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.87 82.0 5.68e-01 100.0% 37.4%
3186674 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.87 81.0 6.07e-01 100.0% 44.7%
3777423 109.3.1.164 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.87 82.0 5.47e-01 100.0% 32.4%
3575869 109.3.1.170 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_4 0.86 76.0 6.80e-01 94.0% 72.2%
3879999 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.86 80.0 5.73e-01 100.0% 43.4%
5046120 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.86 80.0 6.33e-01 100.0% 58.4%
3491859 109.3.1.176 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2, Ank_3, Ank_4 0.86 79.0 5.91e-01 100.0% 51.0%
335803 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.86 78.0 6.81e-01 98.5% 73.2%
4021542 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.86 79.0 4.54e-01 100.0% 12.4%
3916064 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.86 79.0 6.23e-01 100.0% 56.2%
136326 109.3.1.164 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.85 79.0 6.32e-01 100.0% 61.3%
3479157 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.85 79.0 5.62e-01 100.0% 42.8%
3212647 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.85 79.0 5.58e-01 100.0% 39.5%
3472824 109.3.1.163 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.85 79.0 5.62e-01 100.0% 42.8%
3762828 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.85 79.0 4.86e-01 100.0% 22.0%
4018105 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.85 79.0 5.82e-01 100.0% 51.2%
3536600 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.85 79.0 5.81e-01 100.0% 46.9%
3323337 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.85 79.0 6.57e-01 100.0% 65.5%
3540433 109.3.1.99 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2+Ank_5 0.85 78.0 5.55e-01 100.0% 39.5%
3840470 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.85 79.0 5.86e-01 100.0% 48.7%
3770553 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.85 78.0 5.54e-01 100.0% 39.5%
3539153 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.85 78.0 5.94e-01 100.0% 54.5%
2392079 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.85 78.0 5.10e-01 100.0% 27.8%
3803158 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.84 78.0 6.13e-01 100.0% 58.5%
3867749 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.84 78.0 4.79e-01 100.0% 21.7%
4303533 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.84 78.0 5.34e-01 100.0% 37.1%
2136418 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.84 78.0 4.92e-01 100.0% 25.2%
3899739 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.84 78.0 5.43e-01 100.0% 39.0%
3255371 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.84 77.0 5.48e-01 100.0% 41.5%
3724033 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.84 76.0 5.80e-01 100.0% 45.5%
3194891 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.84 78.0 5.86e-01 100.0% 55.3%
3541059 109.3.1.164 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.84 77.0 5.40e-01 100.0% 39.5%
266203 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.84 78.0 5.76e-01 100.0% 45.9%
3211315 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.84 77.0 4.76e-01 100.0% 23.1%
3266654 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.84 75.0 4.47e-01 97.0% 15.7%
3797364 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.83 77.0 6.75e-01 100.0% 80.0%
4017061 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.83 71.0 6.53e-01 92.5% 75.3%
3632660 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.83 74.0 5.25e-01 98.5% 39.5%
3197415 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.82 74.0 5.95e-01 100.0% 52.8%
3915609 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.82 75.0 6.48e-01 100.0% 74.0%
3728888 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.82 75.0 5.08e-01 100.0% 32.2%
3998143 109.3.1.11 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 0.82 71.0 6.80e-01 92.5% 96.0%
3626996 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.82 75.0 4.63e-01 100.0% 26.2%
3274418 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.82 75.0 5.07e-01 100.0% 34.2%
3245130 109.3.1.190 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2, Ank_3, Ank_4, Ank_5 0.82 74.0 5.37e-01 100.0% 40.6%
4011974 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.82 75.0 4.71e-01 100.0% 24.8%
3727990 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.82 76.0 5.02e-01 100.0% 36.8%
3707655 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.81 75.0 5.64e-01 100.0% 50.0%
3185936 109.3.1.20 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.81 74.0 5.36e-01 100.0% 43.4%
3578016 109.3.1.219 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_3, Ank_5 0.81 74.0 6.61e-01 98.5% 82.2%
3199033 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.81 70.0 5.91e-01 95.5% 69.1%
4017062 109.3.1.1 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.80 72.0 4.69e-01 100.0% 23.9%
3197412 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.80 72.0 5.82e-01 100.0% 79.2%
3186673 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.79 71.0 4.50e-01 100.0% 33.4%
3378962 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.79 62.0 4.78e-01 85.1% 64.8%
3645193 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.78 71.0 6.85e-01 100.0% 100.0%
3690958 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.78 70.0 4.96e-01 100.0% 36.4%
5050014 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.78 61.0 5.79e-01 85.1% 93.8%
3207930 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.77 67.0 4.19e-01 100.0% 19.1%
3197410 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.76 68.0 4.14e-01 100.0% 17.4%
4955947 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.74 58.0 5.64e-01 85.1% 96.0%
3675493 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 63.0 4.97e-01 100.0% 51.7%
5001671 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.71 56.0 5.30e-01 85.1% 90.0%
5075377 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.70 55.0 5.03e-01 86.6% 86.7%
5073151 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.70 54.0 5.11e-01 83.6% 95.0%
4989102 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.68 58.0 5.23e-01 92.5% 98.9%
5002850 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.68 53.0 4.84e-01 88.1% 90.5%
4930916 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.67 48.0 4.46e-01 76.1% 88.2%
5041259 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.67 50.0 4.80e-01 82.1% 97.5%
4977761 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.66 51.0 4.71e-01 85.1% 83.3%
4989327 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.63 45.0 3.69e-01 77.6% 56.9%
4950881 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.61 44.0 3.62e-01 77.6% 56.8%
3669280 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.59 48.0 3.59e-01 100.0% 52.7%
D3 medium residues 186-237
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lvqE02 1.25.40.950 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.85 75.0 6.65e-01 98.1% 87.8%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 74.0 4.51e-01 100.0% 18.5%
2dznA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 72.0 4.64e-01 100.0% 24.8%
1qymA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 69.0 4.47e-01 96.2% 25.1%
7kb2B01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 72.0 4.90e-01 100.0% 55.9%
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 72.0 4.65e-01 100.0% 27.2%
4zhbA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 70.0 5.62e-01 100.0% 58.7%
4n5qA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 70.0 4.50e-01 100.0% 30.5%
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 71.0 4.39e-01 100.0% 21.4%
3uxgA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 71.0 4.94e-01 100.0% 37.4%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 69.0 5.69e-01 100.0% 59.8%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 70.0 4.97e-01 100.0% 65.3%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.78 68.0 5.54e-01 100.0% 60.4%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.78 68.0 5.52e-01 100.0% 74.0%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 68.0 5.02e-01 100.0% 48.9%
5h28A02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.77 67.0 5.29e-01 100.0% 56.2%
5ja4D00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 65.0 4.74e-01 100.0% 60.4%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.75 65.0 6.13e-01 100.0% 86.2%
3ezxA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.74 64.0 5.51e-01 100.0% 86.0%
2fztA00 6.10.250.50 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.74 58.0 5.05e-01 84.6% 71.4%
3pubA01 1.10.10.2400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain 0.74 63.0 5.70e-01 100.0% 86.5%
4leuA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 62.0 4.31e-01 100.0% 30.2%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 59.0 4.68e-01 100.0% 75.9%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.69 59.0 5.11e-01 100.0% 84.9%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.67 56.0 4.65e-01 98.1% 72.7%
3mkqB00 1.25.40.470 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 57.0 3.94e-01 100.0% 28.2%
3vsjD00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.66 49.0 3.07e-01 82.7% 24.1%
3fp3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 50.0 3.68e-01 92.3% 34.1%
2bkkC02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.59 49.0 3.51e-01 100.0% 85.5%
2gsvA00 6.10.140.40 Special › Helix non-globular › Helix Hairpins › 0.58 39.0 3.76e-01 75.0% 98.5%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.57 41.0 2.85e-01 78.8% 22.2%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 4.11e-01 92.3% 73.1%
3k6hA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.55 42.0 3.01e-01 86.5% 79.6%
3mabA00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.53 42.0 3.82e-01 100.0% 76.5%
3m6zA03 1.10.150.740 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.53 44.0 4.08e-01 100.0% 75.7%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.52 36.0 2.69e-01 73.1% 55.2%
2r0rB00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.52 37.0 3.39e-01 80.8% 83.3%
1ichA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.51 41.0 3.54e-01 94.2% 81.6%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3372242 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.90 83.0 5.86e-01 100.0% 41.4%
3484878 109.3.1.1 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.86 78.0 5.21e-01 100.0% 35.7%
3253180 109.3.1.171 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.85 77.0 5.00e-01 100.0% 24.2%
3195802 109.3.1.186 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_5 0.84 75.0 4.69e-01 100.0% 21.2%
4306725 109.3.1.20 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.84 74.0 4.67e-01 100.0% 20.0%
3371386 109.3.1.190 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2, Ank_3, Ank_4, Ank_5 0.82 72.0 5.13e-01 100.0% 41.8%
3352641 558.1.1.0 alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain 0.81 56.0 5.77e-01 82.7% 76.0%
3252035 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.80 70.0 4.95e-01 100.0% 36.3%
3258006 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.80 69.0 4.28e-01 100.0% 17.4%
3250143 109.3.1.1 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.77 68.0 4.02e-01 100.0% 16.1%
3999928 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.77 67.0 6.14e-01 100.0% 80.0%
3436448 109.4.1.184 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1 0.74 55.0 5.15e-01 84.6% 64.6%
3354215 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.73 62.0 3.98e-01 100.0% 21.1%
3258187 558.1.1.1 alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › LisH 0.73 60.0 5.95e-01 92.3% 94.5%
3352830 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.72 63.0 4.66e-01 100.0% 38.5%
3328784 109.4.1.1275 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 0.71 62.0 3.42e-01 100.0% 7.1%
3684040 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.71 62.0 4.18e-01 100.0% 26.7%
3819432 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.71 61.0 5.00e-01 100.0% 53.0%
3373809 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.71 61.0 4.40e-01 100.0% 34.2%
3644205 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.71 62.0 4.35e-01 100.0% 31.5%
3361838 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.70 62.0 4.35e-01 100.0% 33.9%
3645626 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 60.0 4.22e-01 100.0% 29.7%
3811561 109.4.1.1267 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.70 62.0 3.42e-01 100.0% 7.2%
3825886 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.70 60.0 3.66e-01 100.0% 14.3%
3810777 109.4.1.2426 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, Eplus_motif, E_motif 0.70 60.0 3.87e-01 100.0% 21.2%
3442732 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.70 61.0 4.60e-01 100.0% 42.3%
3658095 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 61.0 3.85e-01 100.0% 19.3%
3348499 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 60.0 4.89e-01 100.0% 52.0%
3647434 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 59.0 4.85e-01 100.0% 53.0%
3337896 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.69 59.0 3.82e-01 100.0% 20.4%
3654164 109.4.1.1156 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.69 59.0 4.32e-01 100.0% 35.3%
3483462 2012.1.1.0 a/b three-layered sandwiches › LigB-like › LigB-like › LigB-like 0.69 50.0 3.14e-01 86.5% 14.0%
3421937 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 61.0 3.94e-01 100.0% 22.1%
3424708 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.69 59.0 4.40e-01 100.0% 37.9%
3315528 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 59.0 4.06e-01 100.0% 27.4%
3450720 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 60.0 4.25e-01 100.0% 31.5%
3656048 109.4.1.1267 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.68 59.0 3.22e-01 100.0% 5.7%
3824817 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.68 60.0 4.87e-01 100.0% 56.0%
3833265 109.4.1.1335 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.68 59.0 3.38e-01 100.0% 10.4%
3339436 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.68 58.0 4.38e-01 100.0% 39.3%
3665060 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.68 58.0 3.58e-01 100.0% 15.8%
3327326 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.68 58.0 3.30e-01 100.0% 8.4%
3683857 109.4.1.1285 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.67 57.0 3.22e-01 100.0% 8.2%
3462555 109.4.1.1272 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.67 56.0 3.97e-01 100.0% 39.4%
3468311 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.67 57.0 3.47e-01 100.0% 14.3%
3820762 109.4.1.1291 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.67 55.0 3.18e-01 100.0% 12.1%
3360812 109.4.1.1520 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, E_motif 0.67 58.0 3.46e-01 100.0% 13.4%
3817460 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.66 58.0 4.14e-01 100.0% 33.5%
3419226 109.4.1.3173 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.66 57.0 3.47e-01 100.0% 15.1%
3585199 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 58.0 4.26e-01 100.0% 37.9%
3366822 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.66 54.0 3.47e-01 100.0% 24.1%
3672432 109.46.1.11 alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › WD40, Beta-prop_IFT122_1st 0.56 50.0 2.91e-01 100.0% 14.9%
3331372 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.56 37.0 3.20e-01 76.9% 42.4%
4968619 2008.1.1.44 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FokI_cleav_dom 0.56 46.0 3.28e-01 100.0% 44.3%