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ankyrin_repeat_protein
Euk-VirAcanthamoeba_polyphaga_moumouvirus
ankyrin_repeat_protein__YP_007354666__Acanthamoeba_polyphaga_moumouvirus__1269028
Identity
- Accession:
- YP_007354666 ↗
- Protein ID:
- ankyrin_repeat_protein
- Kingdom:
- euk
Quality
73.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Moumouvirus›
Acanthamoeba_polyphaga_moumouvirus
TaxID: 1269028
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 203-266
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.71 | 57.0 | 5.01e-01 | 92.2% | 69.3% |
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 59.0 | 3.93e-01 | 98.4% | 24.9% |
| 6axfA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.69 | 58.0 | 4.85e-01 | 98.4% | 67.5% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 56.0 | 4.56e-01 | 96.9% | 66.7% |
| 4rlyA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.65 | 55.0 | 3.50e-01 | 96.9% | 19.2% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.60 | 51.0 | 4.80e-01 | 98.4% | 97.5% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.58 | 47.0 | 3.97e-01 | 100.0% | 55.8% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 44.0 | 3.79e-01 | 87.5% | 88.1% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 38.0 | 3.57e-01 | 75.0% | 70.7% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.53 | 42.0 | 3.66e-01 | 95.3% | 99.1% |
| 1ihuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 45.0 | 3.12e-01 | 100.0% | 49.8% |
| 1wz2A04 | 3.30.2320.20 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › Class I aminoacyl-tRNA synthetases (RS) | 0.53 | 43.0 | 3.91e-01 | 92.2% | 83.0% |
| 1ui6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 41.0 | 3.01e-01 | 89.1% | 40.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3724867 | 192.15.1.1 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › VPS28 | 0.66 | 52.0 | 4.58e-01 | 89.1% | 80.0% |
| 3743752 | 192.15.1.1 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › VPS28 | 0.64 | 49.0 | 4.55e-01 | 85.9% | 91.8% |
| 3507250 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 44.0 | 3.86e-01 | 93.8% | 81.0% |
| 3504312 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.54 | 46.0 | 4.07e-01 | 98.4% | 89.0% |
| 4618102 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.54 | 39.0 | 3.71e-01 | 78.1% | 88.7% |
| 3516214 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 42.0 | 3.91e-01 | 92.2% | 91.1% |
| 3995141 | 101.1.2.33 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta | 0.54 | 40.0 | 3.71e-01 | 81.2% | 87.1% |
| 360221 | 509.1.1.3 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › USH1C_N | 0.54 | 39.0 | 3.77e-01 | 92.2% | 66.3% |
| 5054079 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.51 | 35.0 | 3.32e-01 | 73.4% | 76.2% |
D2
medium
residues 1-98
D3
medium
residues 99-197
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 47.0 | 3.37e-01 | 100.0% | 50.2% |
| 1e9fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 3.57e-01 | 97.0% | 65.3% |
| 2yvyA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.51 | 44.0 | 4.12e-01 | 99.0% | 80.0% |
| 3mduA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 43.0 | 3.10e-01 | 100.0% | 65.8% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.51 | 44.0 | 4.17e-01 | 100.0% | 85.0% |
| 5jj6B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 39.0 | 4.01e-01 | 93.9% | 90.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3875403 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.66 | 59.0 | 4.61e-01 | 100.0% | 78.6% |
| 3488533 | 109.4.1.365 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTTN_N | 0.60 | 52.0 | 4.80e-01 | 98.0% | 86.2% |
| 3419521 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 4.91e-01 | 98.0% | 89.6% |
| 3849586 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.57 | 45.0 | 3.79e-01 | 86.9% | 53.1% |
| 3306921 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.55 | 45.0 | 3.64e-01 | 99.0% | 44.3% |
| 3775900 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 44.0 | 3.53e-01 | 90.9% | 43.8% |