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ankyrin_repeat_protein
Euk-VirAcanthamoeba_polyphaga_moumouvirus
ankyrin_repeat_protein__YP_007354767__Acanthamoeba_polyphaga_moumouvirus__1269028
Identity
- Accession:
- YP_007354767 ↗
- Protein ID:
- ankyrin_repeat_protein
- Kingdom:
- euk
Quality
70.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Moumouvirus›
Acanthamoeba_polyphaga_moumouvirus
TaxID: 1269028
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-124
D2
medium
residues 173-274
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bszB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.66 | 58.0 | 5.15e-01 | 100.0% | 84.7% |
| 4m7cB00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.64 | 53.0 | 4.30e-01 | 90.2% | 67.2% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 48.0 | 4.61e-01 | 89.2% | 93.3% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 41.0 | 4.06e-01 | 74.5% | 83.8% |
| 5m72A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 49.0 | 4.37e-01 | 97.1% | 66.7% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 45.0 | 4.42e-01 | 92.2% | 87.8% |
| 2genA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 38.0 | 3.17e-01 | 71.6% | 82.4% |
| 3c9hA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 37.0 | 3.35e-01 | 74.5% | 64.8% |
| 3himA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 37.0 | 3.13e-01 | 76.5% | 83.2% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4349221 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.83 | 68.0 | 5.11e-01 | 86.3% | 41.8% |
| 4505757 | 109.3.1.240 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, TPR_8, Ank_4 | 0.69 | 61.0 | 3.77e-01 | 97.1% | 22.3% |
| 3370231 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.68 | 61.0 | 5.76e-01 | 100.0% | 87.1% |
| 3863464 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.67 | 55.0 | 4.91e-01 | 92.2% | 86.0% |
| 3716607 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.66 | 57.0 | 3.43e-01 | 100.0% | 26.3% |
| 3274005 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 58.0 | 3.88e-01 | 100.0% | 49.6% |
| 3248202 | 109.3.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 | 0.65 | 58.0 | 4.88e-01 | 100.0% | 65.1% |
| 3369199 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.64 | 55.0 | 4.89e-01 | 95.1% | 77.9% |
| 3317966 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 49.0 | 5.10e-01 | 84.3% | 98.9% |
| None | — | 0.63 | 56.0 | 3.70e-01 | 98.0% | 23.3% | |
| 3820267 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.63 | 56.0 | 4.12e-01 | 100.0% | 39.3% |
| 3738389 | 109.4.1.958 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Vps41 | 0.63 | 54.0 | 3.89e-01 | 97.1% | 42.3% |
| 3681426 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 54.0 | 3.96e-01 | 98.0% | 35.3% |
| 3667282 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 55.0 | 3.87e-01 | 100.0% | 33.2% |
| 3374025 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.62 | 55.0 | 4.28e-01 | 100.0% | 53.9% |
| 3314245 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 55.0 | 3.87e-01 | 100.0% | 32.9% |
| 3463192 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.62 | 52.0 | 5.24e-01 | 92.2% | 100.0% |
| 3356446 | 109.4.1.1440 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 | 0.62 | 54.0 | 3.81e-01 | 100.0% | 31.8% |
| 3350670 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 54.0 | 4.18e-01 | 100.0% | 46.7% |
| 3803780 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.61 | 50.0 | 5.03e-01 | 92.2% | 99.0% |
| 3429553 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.61 | 50.0 | 4.73e-01 | 91.2% | 82.4% |
| 3353773 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.61 | 53.0 | 4.80e-01 | 100.0% | 77.9% |
| 3832526 | 109.4.1.1860 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, Eplus_motif, E_motif | 0.61 | 54.0 | 3.50e-01 | 100.0% | 22.5% |
| 3814785 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.61 | 53.0 | 4.71e-01 | 100.0% | 74.8% |
| 3558324 | 109.4.1.517 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N | 0.60 | 48.0 | 3.55e-01 | 89.2% | 44.4% |
| 3679964 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.60 | 51.0 | 4.66e-01 | 97.1% | 79.3% |
| 3828676 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.60 | 53.0 | 5.27e-01 | 99.0% | 98.1% |
| 3706872 | 109.4.1.1142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IFT80_172 | 0.60 | 52.0 | 4.00e-01 | 98.0% | 42.5% |
| 3819864 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.59 | 46.0 | 4.70e-01 | 85.3% | 92.0% |
| 3818643 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.59 | 50.0 | 4.74e-01 | 97.1% | 91.2% |
| 4015636 | 109.59.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain | 0.59 | 43.0 | 4.72e-01 | 87.3% | 100.0% |
| 4083082 | 109.4.1.517 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N | 0.57 | 49.0 | 3.65e-01 | 95.1% | 49.1% |
| 3518458 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.55 | 46.0 | 3.44e-01 | 95.1% | 78.1% |
| 4958820 | 109.4.1.791 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 | 0.55 | 46.0 | 4.35e-01 | 97.1% | 80.0% |
| 5029465 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.51 | 36.0 | 3.16e-01 | 75.5% | 90.9% |
D3
medium
residues 275-372
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rfmB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.74 | 63.0 | 4.96e-01 | 95.9% | 47.8% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.73 | 55.0 | 5.86e-01 | 93.9% | 87.5% |
| 5eidA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.73 | 62.0 | 5.75e-01 | 99.0% | 72.4% |
| 4uucA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 60.0 | 4.55e-01 | 95.9% | 39.4% |
| 2ajaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 64.0 | 4.26e-01 | 99.0% | 26.8% |
| 2dznA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 63.0 | 4.73e-01 | 99.0% | 40.7% |
| 1quuA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 49.0 | 4.48e-01 | 71.4% | 74.6% |
| 4rlyA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 62.0 | 4.25e-01 | 95.9% | 30.2% |
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 56.0 | 4.74e-01 | 100.0% | 54.1% |
| 1zeeA01 | 1.20.58.600 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 46.0 | 4.37e-01 | 71.4% | 96.6% |
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 49.0 | 4.66e-01 | 75.5% | 77.0% |
| 2idgA00 | 1.10.3480.10 | Mainly Alpha › Orthogonal Bundle › TorD-like › TorD-like | 0.67 | 47.0 | 3.99e-01 | 82.7% | 45.3% |
| 4bszB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.67 | 56.0 | 4.92e-01 | 92.9% | 68.7% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 45.0 | 5.01e-01 | 70.4% | 89.6% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.66 | 58.0 | 4.91e-01 | 98.0% | 88.5% |
| 7bi4A01 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.66 | 58.0 | 4.75e-01 | 99.0% | 53.8% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 59.0 | 5.60e-01 | 100.0% | 94.0% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 54.0 | 5.25e-01 | 89.8% | 90.7% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 43.0 | 4.82e-01 | 92.9% | 89.3% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 49.0 | 5.27e-01 | 94.9% | 94.1% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.62 | 47.0 | 4.18e-01 | 93.9% | 57.4% |
| 3eslA02 | 1.25.40.930 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 50.0 | 4.69e-01 | 94.9% | 73.1% |
| 2nx4C00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 44.0 | 3.61e-01 | 77.6% | 79.1% |
| 2qw6D00 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.59 | 39.0 | 4.13e-01 | 80.6% | 76.7% |
| 8g0lB01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 48.0 | 3.32e-01 | 92.9% | 32.9% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 51.0 | 4.21e-01 | 100.0% | 69.9% |
| 3qkyA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 44.0 | 3.37e-01 | 84.7% | 47.8% |
| 3m6jA01 | 1.20.1260.40 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.57 | 51.0 | 4.80e-01 | 94.9% | 90.6% |
| 3fp3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 44.0 | 4.00e-01 | 100.0% | 60.7% |
| 4dvyP03 | 1.20.120.1270 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III | 0.57 | 41.0 | 3.42e-01 | 75.5% | 72.6% |
| 3s5rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 40.0 | 3.30e-01 | 76.5% | 83.2% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.55 | 49.0 | 4.28e-01 | 95.9% | 68.0% |
| 1zb1A00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.55 | 48.0 | 3.29e-01 | 99.0% | 38.4% |
| 4iggB06 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 48.0 | 3.73e-01 | 96.9% | 49.3% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.54 | 48.0 | 4.16e-01 | 95.9% | 66.2% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 47.0 | 4.45e-01 | 95.9% | 83.3% |
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 47.0 | 4.18e-01 | 95.9% | 70.5% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 47.0 | 4.14e-01 | 92.9% | 85.2% |
| 4nn1A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 41.0 | 3.29e-01 | 83.7% | 71.2% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.53 | 45.0 | 4.26e-01 | 92.9% | 87.1% |
| 8hdlA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 42.0 | 3.20e-01 | 87.8% | 70.1% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.52 | 44.0 | 4.26e-01 | 92.9% | 85.5% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 44.0 | 3.85e-01 | 94.9% | 88.3% |
| 3vnxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 47.0 | 3.71e-01 | 98.0% | 68.7% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 45.0 | 4.01e-01 | 99.0% | 91.7% |
| 1cg5B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.86e-01 | 94.9% | 90.1% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.81e-01 | 94.9% | 93.2% |
| 6o0aA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.79e-01 | 95.9% | 81.9% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 44.0 | 4.11e-01 | 94.9% | 85.2% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 42.0 | 3.79e-01 | 95.9% | 87.7% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 44.0 | 3.93e-01 | 98.0% | 88.2% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 45.0 | 3.90e-01 | 99.0% | 87.3% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3252617 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.83 | 72.0 | 4.66e-01 | 100.0% | 23.4% |
| None | — | 0.81 | 72.0 | 5.04e-01 | 95.9% | 39.0% | |
| 3252563 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.81 | 74.0 | 5.83e-01 | 100.0% | 51.5% |
| 3716333 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.81 | 64.0 | 4.84e-01 | 82.7% | 89.3% |
| 3791268 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.80 | 63.0 | 4.17e-01 | 95.9% | 22.8% |
| 3619592 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.79 | 64.0 | 4.45e-01 | 95.9% | 29.3% |
| 3260809 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.78 | 61.0 | 5.39e-01 | 95.9% | 59.3% |
| 3257073 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.77 | 57.0 | 5.01e-01 | 76.5% | 56.4% |
| 3724275 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.77 | 67.0 | 4.12e-01 | 100.0% | 17.5% |
| 4306725 | 109.3.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 | 0.77 | 65.0 | 4.62e-01 | 100.0% | 33.5% |
| 3262021 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.76 | 65.0 | 5.38e-01 | 92.9% | 59.4% |
| 3264266 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.75 | 65.0 | 5.43e-01 | 93.9% | 56.2% |
| 3252035 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.75 | 62.0 | 5.21e-01 | 100.0% | 53.8% |
| 3276066 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.74 | 62.0 | 3.95e-01 | 96.9% | 19.8% |
| 3683629 | 109.3.1.188 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28568 | 0.74 | 67.0 | 4.42e-01 | 99.0% | 27.8% |
| 3259949 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.74 | 67.0 | 5.52e-01 | 100.0% | 59.4% |
| 3267790 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.74 | 63.0 | 5.17e-01 | 92.9% | 52.9% |
| 3614924 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 67.0 | 3.93e-01 | 100.0% | 16.6% |
| 3262856 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 65.0 | 3.82e-01 | 100.0% | 13.9% |
| 3275448 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.71 | 58.0 | 4.51e-01 | 95.9% | 41.0% |
| 4577442 | 109.4.1.923 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AEP1 | 0.69 | 60.0 | 4.50e-01 | 95.9% | 45.8% |
| 3295332 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.67 | 59.0 | 4.51e-01 | 99.0% | 43.3% |
| 3253180 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.67 | 61.0 | 4.70e-01 | 100.0% | 48.8% |
| 4236682 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 46.0 | 4.08e-01 | 71.4% | 53.8% |
| 3682468 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.66 | 61.0 | 4.66e-01 | 100.0% | 57.2% |
| 3264766 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.66 | 58.0 | 3.64e-01 | 98.0% | 19.4% |
| 4584852 | 109.4.1.923 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AEP1 | 0.66 | 59.0 | 4.83e-01 | 100.0% | 63.9% |
| 3274514 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.65 | 59.0 | 4.55e-01 | 96.9% | 59.0% |
| 4261872 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.65 | 52.0 | 5.41e-01 | 94.9% | 92.2% |
| 3417450 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.63 | 55.0 | 3.58e-01 | 95.9% | 26.4% |
| 3269023 | 109.4.1.1349 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29011 | 0.61 | 55.0 | 3.87e-01 | 100.0% | 37.7% |
| 4027696 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 54.0 | 4.46e-01 | 100.0% | 66.7% |
| 4034479 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.61 | 41.0 | 3.35e-01 | 70.4% | 85.0% |
| 3465807 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.60 | 50.0 | 4.31e-01 | 100.0% | 57.4% |
| 3976441 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.60 | 44.0 | 4.10e-01 | 77.6% | 84.8% |
| 3306697 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.60 | 52.0 | 4.32e-01 | 100.0% | 54.7% |
| 3268340 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.60 | 53.0 | 4.77e-01 | 98.0% | 87.4% |
| 4605079 | 109.4.1.451 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39 | 0.60 | 52.0 | 3.14e-01 | 100.0% | 15.0% |
| 3294992 | 109.4.1.1285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif | 0.59 | 49.0 | 2.96e-01 | 100.0% | 13.3% |
| 3263668 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.59 | 51.0 | 4.96e-01 | 95.9% | 85.7% |
| 3829890 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.59 | 50.0 | 4.37e-01 | 95.9% | 63.3% |
| 3298613 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.58 | 50.0 | 3.67e-01 | 100.0% | 34.4% |
| 3670172 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.58 | 48.0 | 3.48e-01 | 100.0% | 30.8% |
| 3780808 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.57 | 52.0 | 4.90e-01 | 96.9% | 80.5% |
| 3478235 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.57 | 49.0 | 4.49e-01 | 92.9% | 89.8% |
| 3318169 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.56 | 48.0 | 4.21e-01 | 100.0% | 62.0% |
| 3536246 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 51.0 | 4.37e-01 | 95.9% | 86.2% |
| 3645625 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 46.0 | 3.59e-01 | 100.0% | 39.1% |
| 3356746 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 47.0 | 4.09e-01 | 100.0% | 60.0% |
| 3833909 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.56 | 49.0 | 4.32e-01 | 95.9% | 67.4% |
| 3604704 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.56 | 43.0 | 3.84e-01 | 82.7% | 92.1% |
| 3830809 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.55 | 49.0 | 4.61e-01 | 95.9% | 82.5% |
| 4057450 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.55 | 48.0 | 3.71e-01 | 91.8% | 64.0% |
| 3280988 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.55 | 38.0 | 4.12e-01 | 94.9% | 87.5% |
| 3450864 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.55 | 49.0 | 4.19e-01 | 95.9% | 65.3% |
| 3410814 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.54 | 47.0 | 4.38e-01 | 95.9% | 78.4% |
| 3447070 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.53 | 48.0 | 4.33e-01 | 96.9% | 80.8% |
| 5065387 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.53 | 47.0 | 4.48e-01 | 95.9% | 86.0% |
| 3586652 | 109.4.1.1514 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_8, TPR_16 | 0.53 | 44.0 | 3.12e-01 | 100.0% | 28.0% |
| 3466334 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 47.0 | 4.27e-01 | 95.9% | 80.8% |
| 3405706 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.53 | 46.0 | 4.19e-01 | 95.9% | 80.0% |
| 3974230 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 49.0 | 4.83e-01 | 98.0% | 91.4% |
| 3498899 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 46.0 | 4.15e-01 | 95.9% | 80.7% |
| 3720522 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.52 | 47.0 | 3.43e-01 | 99.0% | 72.7% |
| 3999040 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 45.0 | 3.76e-01 | 95.9% | 83.5% |
| 4962556 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.52 | 44.0 | 4.24e-01 | 95.9% | 83.5% |
| 3814234 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.51 | 44.0 | 4.04e-01 | 95.9% | 71.5% |
| 3211044 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.50 | 44.0 | 4.10e-01 | 95.9% | 84.2% |
| 3246425 | 180.1.1.6 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › FIT | 0.50 | 44.0 | 3.43e-01 | 98.0% | 44.7% |