←Back to structures
aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00027
Bact-Viraot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00027
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-108
Domain cluster:
rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00514__D1-118
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7smgD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.89 | 66.0 | 5.92e-01 | 85.2% | 58.5% |
| 3nqwA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.88 | 72.0 | 5.87e-01 | 84.3% | 51.1% |
| 1vj7B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.83 | 78.0 | 6.49e-01 | 100.0% | 61.3% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.73 | 57.0 | 6.29e-01 | 84.3% | 100.0% |
| 4an8A02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.64 | 47.0 | 4.59e-01 | 77.8% | 94.3% |
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.62 | 54.0 | 4.77e-01 | 95.4% | 83.3% |
| 2n3eA01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.61 | 49.0 | 4.81e-01 | 87.0% | 100.0% |
| 7dfeA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.61 | 44.0 | 4.16e-01 | 74.1% | 66.9% |
| 1sxjD03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.61 | 34.0 | 3.73e-01 | 90.7% | 65.9% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 37.0 | 4.30e-01 | 79.6% | 94.7% |
| 1hw1A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.56 | 43.0 | 3.87e-01 | 80.6% | 62.3% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.56 | 38.0 | 4.18e-01 | 81.5% | 87.2% |
| 3q1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.56 | 45.0 | 4.14e-01 | 86.1% | 89.2% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.55 | 34.0 | 3.76e-01 | 93.5% | 76.7% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.55 | 39.0 | 3.57e-01 | 75.0% | 70.6% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 37.0 | 3.21e-01 | 74.1% | 94.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973478 | 131.1.1.12 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 | 0.88 | 71.0 | 5.81e-01 | 83.3% | 55.9% |
| 3665874 | 131.1.1.12 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 | 0.84 | 77.0 | 5.97e-01 | 97.2% | 48.8% |
| 3961396 | 131.1.1.12 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 | 0.83 | 74.0 | 5.92e-01 | 92.6% | 53.7% |
| 4929438 | 131.1.1.12 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 | 0.83 | 76.0 | 6.14e-01 | 99.1% | 55.3% |
| 3668020 | 131.1.1.12 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 | 0.82 | 76.0 | 5.99e-01 | 97.2% | 53.7% |
| 4989921 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.62 | 44.0 | 3.73e-01 | 73.1% | 51.9% |
| 4543848 | 632.3.1.18 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › GEP5 | 0.61 | 52.0 | 5.10e-01 | 94.4% | 100.0% |
| 5016106 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.59 | 43.0 | 3.82e-01 | 75.9% | 94.2% |
| 4944039 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 42.0 | 3.51e-01 | 75.0% | 49.3% |
| 3566988 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.59 | 41.0 | 3.94e-01 | 73.1% | 89.2% |
| 3270967 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.58 | 42.0 | 3.91e-01 | 75.9% | 77.9% |
| 3251839 | 601.1.2.4 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_R4 | 0.58 | 42.0 | 3.97e-01 | 75.9% | 90.4% |
| 4148138 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.58 | 40.0 | 3.38e-01 | 72.2% | 49.5% |
| 396834 | 5049.1.2.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Urea transporter › UT | 0.58 | 46.0 | 3.30e-01 | 87.0% | 85.0% |
| 4254266 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.58 | 41.0 | 3.54e-01 | 75.0% | 68.9% |
| 3239799 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.56 | 41.0 | 3.44e-01 | 76.9% | 88.9% |
| 3836118 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.55 | 40.0 | 4.06e-01 | 87.0% | 77.3% |
| 4147641 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.54 | 36.0 | 3.67e-01 | 75.9% | 66.4% |
| 3365824 | 5059.1.1.3 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT | 0.54 | 43.0 | 3.19e-01 | 89.8% | 66.3% |
| 3599211 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 44.0 | 4.14e-01 | 90.7% | 85.2% |
| 169819 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.54 | 36.0 | 2.78e-01 | 82.4% | 29.6% |
| 3804601 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.53 | 37.0 | 3.74e-01 | 73.1% | 90.0% |
D2
medium
residues 109-213
Domain cluster:
rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00514__D119-207