←Back to structures
aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00048
Bact-Viraot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00048
Identity
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-71
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.59 | 40.0 | 2.90e-01 | 70.9% | 97.5% |
| 3vsvA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 39.0 | 3.00e-01 | 76.4% | 82.8% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 36.0 | 3.17e-01 | 96.4% | 41.1% |
| 2uv8A05 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 38.0 | 2.23e-01 | 80.0% | 31.4% |
| 7ob9B02 | 3.90.1800.10 | Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain | 0.52 | 36.0 | 2.97e-01 | 72.7% | 81.4% |
| 3omzA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.58e-01 | 100.0% | 72.8% |
| 7vbnL01 | 3.30.160.190 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain | 0.51 | 37.0 | 3.30e-01 | 85.5% | 81.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3681134 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 28.0 | 2.99e-01 | 72.7% | 48.0% |
| 3575366 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.55 | 37.0 | 3.26e-01 | 96.4% | 42.1% |
| 4628855 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.55 | 39.0 | 2.81e-01 | 78.2% | 63.2% |
| 4242915 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.52 | 37.0 | 4.05e-01 | 100.0% | 93.3% |
| 5017536 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.52 | 37.0 | 4.05e-01 | 100.0% | 93.3% |
| 3180654 | 299.1.1.0 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain | 0.50 | 42.0 | 3.31e-01 | 100.0% | 83.0% |
| 3613089 | 601.1.1.141 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF7760 | 0.50 | 39.0 | 2.67e-01 | 90.9% | 53.3% |
| None | — | 0.50 | 41.0 | 2.74e-01 | 100.0% | 50.4% |