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aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00099
Bact-Viraot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00099
Identity
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-108
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.64 | 57.0 | 5.13e-01 | 100.0% | 71.3% |
| 3htvA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 42.0 | 4.09e-01 | 100.0% | 60.4% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 37.0 | 4.32e-01 | 91.8% | 86.4% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.62 | 38.0 | 4.32e-01 | 100.0% | 83.1% |
| 1xc3A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 36.0 | 3.58e-01 | 99.0% | 56.3% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 31.0 | 4.10e-01 | 77.6% | 100.0% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.59 | 46.0 | 4.75e-01 | 94.9% | 87.2% |
| 4htlA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 37.0 | 3.68e-01 | 100.0% | 61.0% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.57 | 42.0 | 4.20e-01 | 78.6% | 83.7% |
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 47.0 | 4.55e-01 | 100.0% | 84.3% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.54 | 39.0 | 3.27e-01 | 94.9% | 42.8% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.54 | 44.0 | 4.39e-01 | 99.0% | 85.8% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 38.0 | 2.98e-01 | 76.5% | 93.0% |
| 1lshA01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.53 | 45.0 | 3.31e-01 | 92.9% | 87.5% |
| 3h6eB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 37.0 | 3.77e-01 | 100.0% | 72.7% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 43.0 | 3.05e-01 | 85.7% | 81.6% |
| 2oap101 | 3.30.450.380 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 38.0 | 2.97e-01 | 74.5% | 67.7% |
| 6eotD01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.53 | 40.0 | 2.57e-01 | 81.6% | 25.6% |
| 8ew8A01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.53 | 44.0 | 3.34e-01 | 90.8% | 75.0% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.53 | 45.0 | 3.55e-01 | 93.9% | 66.2% |
| 1dhxA03 | 3.90.249.10 | Alpha Beta › Alpha-Beta Complex › Hexon Major Viral Coat Protein; domain 3 › Hexon Major Viral Coat Protein, domain 3 | 0.52 | 41.0 | 3.10e-01 | 85.7% | 98.4% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.52 | 44.0 | 4.05e-01 | 89.8% | 79.5% |
| 3u7vA02 | 2.60.220.20 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus | 0.52 | 44.0 | 3.83e-01 | 90.8% | 93.1% |
| 1ejfA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.45e-01 | 70.4% | 76.4% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.52 | 42.0 | 3.03e-01 | 88.8% | 92.6% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 35.0 | 3.70e-01 | 80.6% | 80.0% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 44.0 | 3.76e-01 | 94.9% | 73.1% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 39.0 | 4.00e-01 | 100.0% | 84.2% |
| 2zgoA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.52e-01 | 88.8% | 68.3% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.51 | 40.0 | 3.86e-01 | 100.0% | 73.5% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 43.0 | 3.62e-01 | 96.9% | 72.1% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.51 | 42.0 | 3.84e-01 | 94.9% | 81.3% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.50 | 42.0 | 4.08e-01 | 91.8% | 97.3% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 35.0 | 3.71e-01 | 73.5% | 94.3% |
| 3ll3B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 45.0 | 3.38e-01 | 100.0% | 96.3% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.50 | 41.0 | 4.13e-01 | 86.7% | 99.0% |
| 3v8uA04 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 43.0 | 3.84e-01 | 95.9% | 90.8% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3716329 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.76 | 69.0 | 5.75e-01 | 99.0% | 72.7% |
| 5017154 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.74 | 67.0 | 6.02e-01 | 100.0% | 89.6% |
| 4034488 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.71 | 62.0 | 5.65e-01 | 99.0% | 92.6% |
| 5048066 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.66 | 56.0 | 5.50e-01 | 96.9% | 86.7% |
| 4332725 | 295.1.1.2 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA | 0.65 | 58.0 | 5.27e-01 | 100.0% | 73.8% |
| 185116 | 295.1.1.2 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA | 0.64 | 57.0 | 5.11e-01 | 100.0% | 70.8% |
| 3996732 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 40.0 | 2.87e-01 | 90.8% | 21.7% |
| 3974596 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 32.0 | 4.08e-01 | 91.8% | 89.1% |
| 4426276 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 37.0 | 4.22e-01 | 85.7% | 85.7% |
| 5063612 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.56 | 48.0 | 3.99e-01 | 100.0% | 82.6% |
| 4945114 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.56 | 48.0 | 3.91e-01 | 99.0% | 78.5% |
| 4650312 | 9.1.1.67 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PF29223 | 0.55 | 47.0 | 4.51e-01 | 93.9% | 80.9% |
| 4278695 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.54 | 37.0 | 4.04e-01 | 100.0% | 87.5% |
| 4309285 | 3844.2.1.2 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 | 0.54 | 44.0 | 3.55e-01 | 87.8% | 62.7% |
| 3787545 | 813.1.1.2 ↗ | a+b two layers › Chalcone isomerase › Chalcone isomerase › Chalcone isomerase › Chalcone_2 | 0.54 | 45.0 | 3.52e-01 | 90.8% | 74.6% |
| 3496183 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 41.0 | 2.53e-01 | 82.7% | 28.6% |
| 3718765 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 45.0 | 3.82e-01 | 91.8% | 76.8% |
| 3482680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 31.0 | 3.55e-01 | 83.7% | 86.2% |
| 1412427 | 3784.1.1.1 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › DUF4883 | 0.52 | 44.0 | 4.07e-01 | 89.8% | 80.2% |
| 3462336 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 43.0 | 3.83e-01 | 93.9% | 75.2% |
| 3251045 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.51 | 37.0 | 3.19e-01 | 74.5% | 55.8% |
| 3648228 | 813.1.1.2 ↗ | a+b two layers › Chalcone isomerase › Chalcone isomerase › Chalcone isomerase › Chalcone_2 | 0.51 | 42.0 | 3.29e-01 | 90.8% | 72.1% |
| 3865191 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.51 | 39.0 | 3.76e-01 | 100.0% | 72.7% |
| 3223629 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.51 | 35.0 | 3.73e-01 | 91.8% | 81.2% |
| 3916003 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.50 | 39.0 | 3.70e-01 | 100.0% | 69.6% |
| 3894385 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 41.0 | 2.93e-01 | 89.8% | 95.9% |