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aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00193
Bact-Viraot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00193
Identity
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-115
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.56 | 50.0 | 4.57e-01 | 98.1% | 80.0% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 35.0 | 3.92e-01 | 89.7% | 89.0% |
| 3uoaB02 | 2.60.40.3360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.94e-01 | 89.7% | 89.7% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.79e-01 | 99.1% | 68.4% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.50 | 40.0 | 4.08e-01 | 99.1% | 87.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944430 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.62 | 40.0 | 4.50e-01 | 86.0% | 87.5% |
| 4948022 | 243.6.1.13 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › UPF0113 | 0.60 | 43.0 | 4.49e-01 | 73.8% | 94.7% |
| 3673068 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.58 | 50.0 | 3.99e-01 | 94.4% | 57.7% |
| 3625996 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.58 | 42.0 | 4.35e-01 | 86.0% | 82.0% |
| 4995415 | 243.6.1.5 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › UPF0113_N | 0.58 | 43.0 | 4.67e-01 | 90.7% | 94.4% |
| 184861 | 331.17.1.1 ↗ | a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 | 0.57 | 49.0 | 4.07e-01 | 96.3% | 52.9% |
| 3937046 | 9.2.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7043 | 0.56 | 39.0 | 3.93e-01 | 70.1% | 87.6% |
| 3742908 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.56 | 41.0 | 4.32e-01 | 85.0% | 85.3% |
| 3576800 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.56 | 41.0 | 4.27e-01 | 85.0% | 85.3% |
| 4989124 | 243.6.1.5 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › UPF0113_N | 0.56 | 40.0 | 4.38e-01 | 91.6% | 94.1% |
| 3675115 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.55 | 48.0 | 3.68e-01 | 97.2% | 64.9% |
| 3378938 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.55 | 48.0 | 3.67e-01 | 97.2% | 65.5% |
| 3431623 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.54 | 44.0 | 4.24e-01 | 89.7% | 87.2% |
| 3783544 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.53 | 41.0 | 4.01e-01 | 87.9% | 73.3% |
| 5076469 | 243.6.1.5 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › UPF0113_N | 0.53 | 42.0 | 4.42e-01 | 85.0% | 98.9% |
| 3807917 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.53 | 46.0 | 3.59e-01 | 97.2% | 58.7% |
| 3787818 | 2.9.1.0 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like | 0.53 | 39.0 | 2.49e-01 | 77.6% | 57.3% |
| 4002631 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.53 | 38.0 | 3.40e-01 | 74.8% | 72.5% |
| 3173222 | 4075.1.1.0 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain | 0.52 | 42.0 | 4.12e-01 | 86.0% | 89.6% |
| 4614038 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 41.0 | 3.82e-01 | 99.1% | 68.4% |
| 3230551 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 4.00e-01 | 86.9% | 92.2% |
| 4046583 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.50 | 39.0 | 3.72e-01 | 99.1% | 70.0% |
D2
high
residues 118-238
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 4.15e-01 | 96.7% | 88.7% |
| 1cy5A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 29.0 | 3.27e-01 | 86.8% | 67.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3477962 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.56 | 38.0 | 4.29e-01 | 85.1% | 91.1% |
| 4030463 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.53 | 43.0 | 2.81e-01 | 87.6% | 42.7% |
| 3690755 | 109.5.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › adenylylcyclase associated protein, CAP-N › adenylylcyclase associated protein, CAP-N › CAP_N | 0.51 | 39.0 | 3.32e-01 | 78.5% | 84.2% |
| 3246986 | 109.5.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › adenylylcyclase associated protein, CAP-N › adenylylcyclase associated protein, CAP-N › CAP_N | 0.50 | 38.0 | 3.34e-01 | 78.5% | 92.6% |
D3
high
residues 243-327
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 48.0 | 5.57e-01 | 75.3% | 100.0% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 54.0 | 5.79e-01 | 89.4% | 100.0% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 50.0 | 5.44e-01 | 87.1% | 97.1% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 49.0 | 5.33e-01 | 88.2% | 93.0% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 52.0 | 5.50e-01 | 88.2% | 97.3% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 56.0 | 4.84e-01 | 92.9% | 99.2% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 46.0 | 5.17e-01 | 92.9% | 93.9% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 5.53e-01 | 89.4% | 97.3% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 53.0 | 5.47e-01 | 87.1% | 97.5% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 45.0 | 5.01e-01 | 90.6% | 92.4% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 55.0 | 5.23e-01 | 96.5% | 79.0% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 53.0 | 5.40e-01 | 96.5% | 92.7% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 48.0 | 5.13e-01 | 87.1% | 91.9% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 52.0 | 5.31e-01 | 87.1% | 96.3% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 52.0 | 4.87e-01 | 95.3% | 74.3% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 51.0 | 5.32e-01 | 92.9% | 100.0% |
| 6dgiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.60 | 40.0 | 4.43e-01 | 92.9% | 86.8% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.60 | 39.0 | 4.47e-01 | 91.8% | 96.6% |
| 6rtqA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.57 | 44.0 | 3.88e-01 | 84.7% | 94.0% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 3.97e-01 | 92.9% | 56.9% |
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 39.0 | 3.41e-01 | 74.1% | 90.0% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 41.0 | 3.71e-01 | 81.2% | 77.3% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.52 | 46.0 | 3.96e-01 | 100.0% | 89.1% |
| 3v8uA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 39.0 | 3.21e-01 | 88.2% | 98.9% |
| 3uc1A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.50 | 44.0 | 2.99e-01 | 96.5% | 61.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 49.0 | 5.69e-01 | 87.1% | 100.0% |
| 3598657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 55.0 | 5.20e-01 | 88.2% | 73.0% |
| 3626383 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.69 | 52.0 | 5.01e-01 | 80.0% | 78.9% |
| 3787684 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 51.0 | 4.81e-01 | 82.4% | 79.0% |
| 3482844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 5.19e-01 | 83.5% | 92.9% |
| 5044296 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 52.0 | 5.45e-01 | 87.1% | 100.0% |
| 4013487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 53.0 | 4.92e-01 | 89.4% | 81.8% |
| 4937391 | 4160.1.1.1 ↗ | beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Peptidase_M29 | 0.65 | 57.0 | 4.42e-01 | 100.0% | 95.4% |
| 3500378 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.65 | 57.0 | 5.23e-01 | 97.6% | 80.9% |
| 4004815 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.65 | 56.0 | 5.00e-01 | 97.6% | 71.5% |
| 3277139 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 56.0 | 5.07e-01 | 96.5% | 71.3% |
| 3927391 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 54.0 | 5.10e-01 | 92.9% | 80.6% |
| 3701868 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 50.0 | 5.00e-01 | 89.4% | 88.9% |
| 4485354 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 51.0 | 4.98e-01 | 92.9% | 81.9% |
| 3272363 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.61 | 47.0 | 4.53e-01 | 88.2% | 71.6% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.59 | 44.0 | 4.56e-01 | 83.5% | 86.3% |
| 3721787 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 4.74e-01 | 87.1% | 91.8% |
| 4220126 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.58 | 44.0 | 4.43e-01 | 88.2% | 82.4% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.57 | 45.0 | 4.59e-01 | 84.7% | 93.8% |
| 4675848 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.57 | 45.0 | 3.95e-01 | 89.4% | 93.5% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.56 | 45.0 | 4.71e-01 | 89.4% | 98.7% |
| 4269858 | 4.1.1.312 ↗ | beta barrels › SH3 › SH3 › SH3 › Med13_N | 0.55 | 45.0 | 4.34e-01 | 92.9% | 97.0% |
| 3744268 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.55 | 41.0 | 3.57e-01 | 81.2% | 77.8% |
| 4989860 | 221.1.3.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain › Oxidored_molyb | 0.54 | 45.0 | 3.55e-01 | 92.9% | 58.4% |
| 3881192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 45.0 | 3.66e-01 | 94.1% | 52.9% |
| 5055312 | 221.1.3.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain | 0.52 | 44.0 | 3.63e-01 | 94.1% | 65.8% |
| 5071692 | 221.1.3.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain › Oxidored_molyb | 0.52 | 43.0 | 3.34e-01 | 92.9% | 54.4% |
| 5026280 | 221.1.3.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain › Oxidored_molyb | 0.51 | 43.0 | 3.35e-01 | 92.9% | 56.3% |
| 4646862 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.51 | 40.0 | 3.75e-01 | 98.8% | 69.1% |