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aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00200
Bact-Viraot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00200
Identity
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-96
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wzkA02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.72 | 51.0 | 4.10e-01 | 76.2% | 54.3% |
| 7qocA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.66 | 56.0 | 4.12e-01 | 100.0% | 37.4% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.63 | 48.0 | 4.30e-01 | 85.7% | 71.9% |
| 4aciA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 41.0 | 3.02e-01 | 74.6% | 42.0% |
| 3on2A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 45.0 | 3.31e-01 | 88.9% | 58.4% |
| 1ie9A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 46.0 | 3.14e-01 | 93.7% | 49.8% |
| 6w6jD01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.55 | 42.0 | 3.46e-01 | 88.9% | 85.5% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.54 | 46.0 | 3.67e-01 | 100.0% | 92.8% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.53 | 37.0 | 3.38e-01 | 76.2% | 98.9% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.52 | 36.0 | 2.96e-01 | 71.4% | 58.5% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 41.0 | 3.42e-01 | 87.3% | 88.4% |
| 4bwrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 40.0 | 2.49e-01 | 93.7% | 30.4% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.51 | 38.0 | 3.52e-01 | 81.0% | 67.9% |
| 4eadA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.51 | 44.0 | 3.75e-01 | 100.0% | 65.4% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.50 | 38.0 | 3.38e-01 | 87.3% | 92.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004908 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.90 | 84.0 | 5.77e-01 | 100.0% | 33.7% |
| 3640226 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 48.0 | 3.52e-01 | 88.9% | 35.4% |
| 4409479 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.61 | 50.0 | 4.22e-01 | 96.8% | 94.8% |
| 4339359 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.59 | 37.0 | 2.87e-01 | 98.4% | 31.5% |
| 3261919 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 3.36e-01 | 100.0% | 47.5% |
| 3290011 | 3843.1.1.4 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB | 0.54 | 37.0 | 3.34e-01 | 73.0% | 73.7% |
| 4032062 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.54 | 35.0 | 2.98e-01 | 98.4% | 37.3% |
| 3578021 | 109.54.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › DUF7951 | 0.54 | 46.0 | 3.24e-01 | 100.0% | 47.7% |
| 5001078 | 633.2.1.0 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein | 0.51 | 42.0 | 3.72e-01 | 100.0% | 61.1% |
| 4433680 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.51 | 43.0 | 4.21e-01 | 98.4% | 97.1% |
| 3413696 | 1045.1.1.0 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 | 0.51 | 35.0 | 3.19e-01 | 81.0% | 52.2% |
| 3210479 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.50 | 40.0 | 3.99e-01 | 85.7% | 100.0% |
| 3285340 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.50 | 39.0 | 3.03e-01 | 90.5% | 63.7% |