←Back to structures

aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00218

Bact-Vir

aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00218

Identity

Kingdom:
phage

Quality

85.6 mean pLDDT

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 104-281
PDB
Domain cluster: rep: js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00148__D63-262
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5jcvA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.91 81.0 8.22e-01 98.3% 93.7%
1ng5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.90 83.0 7.82e-01 100.0% 81.6%
3psqB00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.89 81.0 8.08e-01 98.9% 91.8%
4ux7A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.89 81.0 7.69e-01 98.9% 82.4%
2kw8A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.85 60.0 6.40e-01 100.0% 81.0%
4y4qA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.85 74.0 7.57e-01 100.0% 93.1%
3fn5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.83 61.0 6.41e-01 100.0% 81.6%
4d70A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.83 58.0 6.19e-01 99.4% 79.4%
5k9aA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.82 60.0 5.57e-01 100.0% 61.4%
2w1jA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.82 60.0 5.77e-01 100.0% 67.7%
2w1kA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.82 59.0 5.60e-01 100.0% 63.5%
1t2pA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.78 58.0 6.43e-01 99.4% 93.1%
2ln7A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.78 56.0 6.15e-01 100.0% 88.4%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 34.0 4.10e-01 98.3% 92.2%
2osoA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.51 32.0 3.35e-01 96.1% 67.5%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 36.0 4.01e-01 98.9% 92.8%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1942280 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.93 78.0 7.78e-01 98.3% 84.2%
1824763 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.91 81.0 8.22e-01 98.3% 93.7%
2129791 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.90 84.0 7.85e-01 99.4% 81.5%
811 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.90 84.0 7.52e-01 100.0% 73.6%
142114 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.88 82.0 8.06e-01 98.9% 91.9%
4135582 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.86 61.0 5.94e-01 100.0% 67.4%
1569000 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.85 74.0 7.57e-01 100.0% 93.1%
2879064 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.84 60.0 6.66e-01 100.0% 89.7%
4344990 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.84 46.0 6.18e-01 75.3% 97.0%
5024134 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.83 56.0 6.37e-01 98.3% 87.1%
4033467 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.83 61.0 6.17e-01 98.9% 74.4%
4953572 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.83 57.0 6.51e-01 100.0% 91.1%
1566317 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.83 58.0 6.19e-01 99.4% 79.4%
1842342 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.82 60.0 5.57e-01 100.0% 61.4%
169822 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.82 59.0 5.60e-01 100.0% 63.5%
2832652 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.82 59.0 5.79e-01 100.0% 68.8%
154269 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.81 59.0 5.64e-01 100.0% 65.0%
3587062 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.81 59.0 5.39e-01 100.0% 58.7%
4102870 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.80 63.0 5.74e-01 100.0% 63.2%
428579 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.80 56.0 6.32e-01 100.0% 92.0%
2775426 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.80 58.0 5.59e-01 100.0% 66.7%
3589952 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.79 60.0 5.91e-01 100.0% 74.1%
4868829 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.79 54.0 6.45e-01 95.5% 100.0%
3587540 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.78 59.0 6.22e-01 98.9% 85.3%
2046344 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.64 59.0 5.62e-01 100.0% 84.1%
4289996 1.1.5.15 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.56 36.0 4.01e-01 99.4% 79.3%
3281195 1.1.5.15 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.54 34.0 4.03e-01 100.0% 91.1%