Back to structures

aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00267

Bact-Vir

aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00267

Identity

Kingdom:
phage

Quality

83.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-37_69-291
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF05621.18 best TniB 32.4 8.90e-08 69.4% 76.7%
PF13401.13 AAA_22 65.5 8.30e-18 62.7% 96.9%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8ea4D01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.87 54.0 6.91e-01 87.1% 100.0%
7rzy101 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.86 60.0 6.96e-01 87.8% 94.7%
7mcsC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 66.0 7.25e-01 85.9% 100.0%
1sxjE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 43.0 5.48e-01 89.8% 92.9%
3bosB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 42.0 5.26e-01 89.4% 90.1%
1g41A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 52.0 5.89e-01 92.9% 100.0%
7swlB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 45.0 5.52e-01 89.0% 100.0%
2qenA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 50.0 5.61e-01 89.0% 94.6%
3zh9B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 38.0 4.97e-01 87.1% 100.0%
4kfuA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 39.0 4.35e-01 82.4% 76.1%
3sylA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 46.0 5.17e-01 97.3% 95.5%
1szpB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 43.0 4.76e-01 94.1% 84.8%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 46.0 4.86e-01 96.1% 86.6%
7alvA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 45.0 5.02e-01 100.0% 98.0%
1um8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 51.0 5.35e-01 98.8% 99.6%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 39.0 4.28e-01 92.2% 80.8%
6j19A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 4.54e-01 100.0% 77.8%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 43.0 4.86e-01 100.0% 98.0%
3rc3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 36.0 4.48e-01 71.0% 98.1%
3jzmA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 41.0 4.17e-01 92.9% 72.6%
4wiaC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 40.0 4.27e-01 96.1% 80.5%
4a8jA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 46.0 4.47e-01 95.7% 77.6%
6tqfA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 43.0 4.72e-01 99.6% 94.9%
1sgwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 42.0 4.69e-01 94.5% 98.0%
5irmC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 4.78e-01 100.0% 95.5%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 41.0 4.61e-01 92.5% 97.9%
3vu9A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 41.0 4.48e-01 96.9% 90.2%
8gj8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 4.54e-01 96.1% 86.4%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 4.65e-01 90.6% 99.5%
2ihyA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 4.36e-01 94.5% 83.5%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 4.60e-01 90.6% 97.6%
6s8oB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 4.58e-01 92.9% 98.1%
4huqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 4.19e-01 94.1% 77.1%
2fywA01 3.40.1390.30 Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › NIF3 (NGG1p interacting factor 3)-like 0.52 23.0 3.16e-01 85.9% 77.7%
4fw9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 45.0 4.33e-01 89.4% 89.4%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 33.0 3.60e-01 87.1% 74.9%
3dx5A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.51 33.0 3.28e-01 100.0% 59.3%
6p6jB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 4.21e-01 92.9% 89.4%
3q9cA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.50 43.0 3.89e-01 89.8% 84.2%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4864143 2004.1.1.127 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TniB 0.88 56.0 6.69e-01 88.2% 91.1%
4955903 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.83 56.0 6.36e-01 89.0% 88.2%
4625225 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.79 56.0 6.22e-01 89.0% 88.1%
4928460 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.78 52.0 6.35e-01 86.7% 100.0%
4979036 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.78 53.0 5.64e-01 88.6% 76.5%
4882893 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.77 60.0 6.40e-01 89.0% 89.9%
3249726 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 54.0 6.14e-01 88.6% 93.8%
3285507 2004.1.1.354 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › nSTAND1 0.74 45.0 5.43e-01 88.6% 89.4%
4012028 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 43.0 5.48e-01 91.4% 97.4%
4024065 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 45.0 5.21e-01 88.6% 85.4%
3663724 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 44.0 5.22e-01 87.8% 88.0%
3590702 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 45.0 4.82e-01 89.0% 71.8%
3722531 2004.1.1.366 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.71 50.0 5.54e-01 88.6% 87.1%
5002765 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 44.0 5.14e-01 89.0% 86.1%
3926808 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 44.0 5.40e-01 89.0% 95.2%
3201660 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 47.0 5.66e-01 99.2% 98.9%
4290912 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.70 45.0 5.24e-01 89.8% 89.4%
4015700 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 44.0 5.03e-01 88.6% 83.7%
None 0.69 43.0 5.13e-01 88.2% 87.8%
4975402 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 44.0 4.54e-01 89.4% 65.3%
None 0.69 53.0 5.92e-01 88.2% 99.0%
4992911 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.69 57.0 6.12e-01 89.4% 98.2%
3727158 2004.1.1.366 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.69 51.0 5.24e-01 89.0% 77.6%
4998712 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 45.0 5.44e-01 89.8% 98.8%
4353506 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.67 51.0 5.10e-01 88.2% 76.5%
3599638 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.67 44.0 4.37e-01 89.4% 63.0%
4966358 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.66 57.0 6.01e-01 89.4% 98.3%
4416168 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.66 51.0 5.68e-01 89.4% 100.0%
4928965 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 57.0 5.51e-01 89.4% 98.6%
3735958 2004.1.1.366 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.66 52.0 3.48e-01 88.6% 23.1%
5059557 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.65 48.0 4.73e-01 89.4% 70.2%
3957732 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 47.0 5.07e-01 100.0% 86.4%
5037846 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 50.0 5.61e-01 82.4% 100.0%
3673255 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 46.0 5.32e-01 97.6% 100.0%
3603655 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.64 54.0 5.10e-01 88.6% 74.6%
3352873 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.62 46.0 4.04e-01 98.0% 52.3%
4387003 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.62 46.0 4.67e-01 99.2% 76.1%
5056137 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.61 44.0 4.58e-01 95.7% 78.5%
3320528 2004.1.1.425 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 0.61 44.0 5.05e-01 100.0% 98.9%
4021485 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 47.0 5.17e-01 100.0% 98.5%
3899547 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.61 50.0 5.23e-01 87.1% 92.8%
4410716 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 45.0 4.66e-01 96.1% 79.5%
3586943 2004.1.1.68 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 0.60 46.0 5.04e-01 100.0% 96.1%
3730885 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 51.0 4.74e-01 87.8% 75.0%
5072980 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.60 42.0 4.39e-01 92.9% 76.6%
4057956 2004.1.1.35 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.60 44.0 4.66e-01 100.0% 83.9%
3512266 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 41.0 4.59e-01 92.9% 86.8%
5059726 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.59 43.0 4.53e-01 92.9% 82.2%
4962866 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.58 42.0 4.44e-01 96.1% 81.8%
3612334 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 55.0 4.61e-01 100.0% 71.5%
4618830 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.58 42.0 4.27e-01 90.6% 73.1%
4093256 2004.1.1.545 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2, AAA_5 0.58 54.0 5.39e-01 98.8% 98.5%
4988482 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.58 40.0 4.32e-01 92.9% 80.5%
5006954 2004.1.1.1217 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 0.57 42.0 4.40e-01 95.3% 81.3%
3520006 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.57 41.0 4.42e-01 95.3% 86.0%
4958933 2004.1.1.1217 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 0.57 41.0 4.25e-01 94.1% 77.7%
5024798 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.56 45.0 4.77e-01 98.4% 92.9%
4947475 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.56 42.0 4.40e-01 96.1% 83.4%
3823475 2004.1.1.294 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ELP6 0.56 43.0 4.38e-01 89.4% 79.2%
3590940 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 42.0 4.23e-01 91.0% 75.8%
3211954 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.56 43.0 4.75e-01 91.0% 98.5%
4989685 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.56 42.0 4.24e-01 96.5% 76.2%
4022961 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 46.0 4.90e-01 100.0% 97.0%
3930251 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.55 40.0 4.22e-01 96.5% 81.7%
4976926 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.54 42.0 4.32e-01 96.1% 82.0%
3727384 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 44.0 4.19e-01 91.8% 71.7%
None 0.54 44.0 4.69e-01 91.4% 96.4%
5056515 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.54 42.0 4.27e-01 94.1% 82.4%
3274280 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.53 43.0 4.23e-01 96.5% 77.1%
4030391 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 43.0 4.28e-01 95.3% 81.1%
3836672 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.52 44.0 4.25e-01 95.3% 79.3%
4575830 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 43.0 3.56e-01 96.9% 50.8%
3962909 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.51 42.0 3.89e-01 96.5% 68.4%
4214084 507.1.1.1 alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.51 42.0 3.47e-01 97.3% 50.1%
D2 high residues 298-369
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bosA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.81 68.0 7.07e-01 98.6% 98.5%
3zh9B02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.81 67.0 6.82e-01 97.2% 91.4%
6vvoC02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.81 65.0 6.83e-01 98.6% 96.9%
1jqjD03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.80 66.0 6.27e-01 100.0% 75.6%
1sxjD02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.79 68.0 6.93e-01 98.6% 97.1%
2l09A01 1.10.8.550 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B 0.77 52.0 5.89e-01 79.2% 96.2%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.76 65.0 6.24e-01 100.0% 83.1%
1q9cA01 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.75 67.0 5.29e-01 100.0% 95.2%
2kebA00 1.10.8.530 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain 0.75 63.0 6.21e-01 100.0% 87.2%
3whkA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.74 63.0 6.31e-01 100.0% 94.4%
2ly8A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.74 65.0 5.49e-01 100.0% 89.3%
2x8aA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.73 66.0 6.36e-01 100.0% 91.3%
7y11B01 1.10.8.20 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p 0.73 55.0 5.79e-01 81.9% 92.1%
2k77A00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.70 52.0 4.17e-01 80.6% 78.6%
1f1eA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.70 61.0 4.84e-01 100.0% 95.4%
1olmC01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.69 62.0 4.11e-01 100.0% 70.0%
7dfeA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.69 50.0 4.23e-01 79.2% 92.1%
1w33A00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.67 59.0 4.47e-01 100.0% 68.5%
1wh4A01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.61 42.0 3.91e-01 72.2% 55.3%
4bg5B00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.61 53.0 3.91e-01 100.0% 66.8%
4dbgB02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.61 45.0 4.77e-01 80.6% 98.4%
4p17A02 1.10.8.270 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains 0.60 51.0 4.54e-01 100.0% 70.0%
4hl4A01 1.10.8.1310 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 51.0 4.15e-01 100.0% 53.4%
4h79A00 1.10.520.40 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › CRISPR-associated protein Cse2 0.59 49.0 3.69e-01 93.1% 65.0%
6tqpA01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.55 43.0 3.61e-01 90.3% 86.8%
2r18A02 1.10.8.880 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 0.55 40.0 4.34e-01 80.6% 98.3%
1lj2A00 1.20.5.970 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Nonstructural RNA-binding protein 0.54 39.0 3.48e-01 77.8% 57.5%
3w4sA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 46.0 3.13e-01 100.0% 38.1%
2xq9A02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.52 38.0 3.29e-01 79.2% 76.9%
2ix5A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 39.0 3.08e-01 80.6% 78.7%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 37.0 2.60e-01 76.4% 86.1%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.51 44.0 3.73e-01 97.2% 75.8%
2vvwA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.51 40.0 3.19e-01 86.1% 72.7%
1lzwA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.51 40.0 3.65e-01 83.3% 83.5%
1oqcA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.50 39.0 3.42e-01 100.0% 55.4%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3059959 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.91 82.0 7.93e-01 97.2% 86.3%
2842242 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.88 82.0 7.91e-01 100.0% 93.7%
4374130 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.83 72.0 6.81e-01 100.0% 80.0%
4204294 148.1.3.21 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 0.83 71.0 7.09e-01 100.0% 90.7%
3590984 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 74.0 7.14e-01 97.2% 90.0%
3387896 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 68.0 6.97e-01 100.0% 92.9%
4458447 148.1.3.21 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 0.81 65.0 6.65e-01 100.0% 90.0%
3191809 148.1.3.42 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid 0.81 73.0 6.22e-01 97.2% 98.2%
4121495 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 69.0 6.80e-01 100.0% 89.3%
4201751 148.1.3.21 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 0.80 69.0 6.52e-01 100.0% 80.0%
4527373 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.80 68.0 6.63e-01 100.0% 85.0%
5080893 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.80 71.0 6.92e-01 100.0% 88.7%
4025082 148.1.3.18 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C 0.80 69.0 6.10e-01 100.0% 65.7%
3964153 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 68.0 6.73e-01 100.0% 90.7%
3787666 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.79 71.0 6.23e-01 100.0% 90.5%
4963759 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 69.0 6.82e-01 100.0% 93.3%
5043762 148.1.3.50 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid 0.78 71.0 7.03e-01 100.0% 97.3%
4626446 148.1.3.18 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C 0.78 68.0 5.98e-01 100.0% 65.7%
52232 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 66.0 6.57e-01 100.0% 90.7%
3176974 148.1.3.15 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_assoc_2 0.78 71.0 6.31e-01 100.0% 83.0%
4353857 148.1.3.325 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30996 0.78 70.0 5.73e-01 100.0% 65.4%
5025839 148.1.3.50 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid 0.78 69.0 6.88e-01 100.0% 94.7%
4946905 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 70.0 6.92e-01 100.0% 94.7%
3666007 148.1.3.18 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C 0.77 67.0 6.22e-01 100.0% 76.7%
4150365 148.1.3.21 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 0.77 65.0 6.19e-01 100.0% 80.0%
4976900 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 70.0 6.45e-01 100.0% 90.0%
5051753 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 68.0 6.50e-01 100.0% 91.8%
3656957 148.1.3.42 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid 0.77 57.0 5.58e-01 95.8% 72.5%
3408523 103.1.1.3 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N 0.76 56.0 5.85e-01 81.9% 86.2%
4468783 148.1.3.18 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C 0.76 66.0 5.91e-01 100.0% 69.0%
4267142 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 66.0 6.53e-01 100.0% 93.3%
5079667 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 70.0 6.72e-01 100.0% 90.0%
4945467 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 69.0 6.68e-01 100.0% 95.0%
4030428 148.1.3.18 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C 0.76 65.0 5.97e-01 100.0% 72.6%
3965589 148.1.3.15 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_assoc_2 0.76 63.0 6.40e-01 93.1% 94.3%
4020947 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 64.0 6.02e-01 100.0% 76.4%
3598095 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 65.0 5.98e-01 100.0% 73.4%
4192878 148.1.3.21 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 0.75 64.0 5.95e-01 100.0% 75.6%
3279253 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 60.0 6.16e-01 100.0% 88.6%
3520608 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.75 64.0 6.09e-01 100.0% 80.0%
3926437 148.1.3.18 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C 0.75 65.0 5.93e-01 100.0% 72.6%
4395479 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.75 64.0 5.85e-01 100.0% 71.6%
3978468 148.1.3.55 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C 0.75 60.0 5.83e-01 88.9% 77.5%
3318092 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.75 66.0 6.58e-01 100.0% 94.7%
5083837 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 64.0 6.49e-01 94.4% 95.7%
4998021 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 68.0 6.74e-01 100.0% 96.0%
3600972 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 63.0 5.98e-01 100.0% 80.0%
4999524 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 65.0 6.34e-01 97.2% 96.2%
4989650 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.74 64.0 5.98e-01 100.0% 77.8%
4666971 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 65.0 6.45e-01 100.0% 94.7%
4327043 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.74 65.0 6.29e-01 100.0% 88.7%
3666426 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 65.0 5.98e-01 100.0% 85.3%
5056788 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.73 65.0 5.76e-01 100.0% 76.2%
4009282 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.73 64.0 6.40e-01 100.0% 98.7%
3268763 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.72 55.0 4.73e-01 80.6% 83.6%
5056114 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 63.0 5.85e-01 97.2% 77.8%
4957062 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 64.0 5.95e-01 100.0% 84.4%
3288961 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 58.0 5.26e-01 100.0% 65.0%
5047340 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.71 62.0 6.14e-01 100.0% 94.7%
3722053 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 62.0 5.94e-01 100.0% 87.1%
5042632 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 63.0 6.29e-01 100.0% 97.3%
5060055 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 60.0 5.43e-01 98.6% 72.0%
3659891 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.69 56.0 3.83e-01 97.2% 25.0%
4031651 4230.1.1.3 alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.68 60.0 5.54e-01 100.0% 84.2%
3289269 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 57.0 5.28e-01 100.0% 71.6%
4013369 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 58.0 5.82e-01 100.0% 94.7%
3230385 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 53.0 4.89e-01 98.6% 65.3%
4018722 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 60.0 5.80e-01 100.0% 91.3%
3479512 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 55.0 5.30e-01 100.0% 78.8%
4012744 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 58.0 4.96e-01 100.0% 71.7%
3721122 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 58.0 5.63e-01 100.0% 88.7%
3686822 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 58.0 5.65e-01 100.0% 91.3%
3345757 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 56.0 5.47e-01 100.0% 98.8%
3327946 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 56.0 5.42e-01 100.0% 87.5%
3728635 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 56.0 5.49e-01 100.0% 97.5%
3437842 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.64 56.0 5.36e-01 100.0% 84.7%
3686448 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 55.0 5.25e-01 100.0% 90.6%
3659870 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.62 55.0 5.25e-01 100.0% 91.8%
3617535 3755.4.1.30 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › TMEM107 0.55 45.0 3.73e-01 91.7% 78.2%
3295009 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 46.0 4.48e-01 100.0% 96.2%
3959665 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.52 38.0 3.56e-01 79.2% 90.5%