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aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single.1__X__X__00108

Bact-Vir

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single.1__X__X__00108

Identity

Kingdom:
phage

Quality

74.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-67
PDB
Domain cluster: representative
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.81 74.0 5.07e-01 100.0% 50.0%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.78 69.0 4.74e-01 100.0% 50.3%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 67.0 5.65e-01 100.0% 72.4%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.73 65.0 4.37e-01 100.0% 65.9%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.71 54.0 5.27e-01 82.6% 100.0%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 58.0 5.30e-01 91.3% 75.4%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 5.71e-01 100.0% 81.4%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 54.0 5.19e-01 87.0% 83.3%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.69 52.0 5.07e-01 82.6% 100.0%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 57.0 5.26e-01 97.8% 88.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 5.00e-01 100.0% 78.3%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 52.0 3.17e-01 91.3% 19.1%
3if4A01 2.20.20.40 Mainly Beta › Single Sheet › Anthopleurin-A › Integron cassette protein 0.66 46.0 4.49e-01 73.9% 92.0%
6ei1A01 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.66 57.0 3.59e-01 100.0% 25.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.90e-01 100.0% 87.2%
1c48A00 2.40.50.70 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 51.0 4.51e-01 89.1% 97.1%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.64 50.0 4.85e-01 84.8% 100.0%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 51.0 3.14e-01 93.5% 22.5%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 55.0 4.11e-01 100.0% 97.5%
1nijA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 48.0 3.17e-01 84.8% 39.3%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 55.0 4.65e-01 100.0% 80.5%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 50.0 3.06e-01 91.3% 18.7%
1iyjB04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 49.0 3.59e-01 91.3% 55.1%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 54.0 4.03e-01 100.0% 97.5%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 50.0 4.43e-01 91.3% 65.7%
3jyyA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.63 46.0 3.38e-01 82.6% 62.7%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 49.0 3.01e-01 93.5% 19.7%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 53.0 3.47e-01 100.0% 50.9%
4rncA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 42.0 2.63e-01 71.7% 22.4%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.61 41.0 4.02e-01 71.7% 68.5%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 52.0 3.90e-01 100.0% 97.6%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 53.0 3.15e-01 100.0% 37.9%
1cboA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 50.0 3.07e-01 97.8% 63.9%
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 47.0 3.86e-01 89.1% 59.3%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 52.0 3.48e-01 100.0% 54.5%
4paaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 49.0 3.18e-01 100.0% 55.1%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 45.0 2.87e-01 93.5% 34.9%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 48.0 3.80e-01 100.0% 77.3%
6ro0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 43.0 3.48e-01 91.3% 82.7%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.57 45.0 3.87e-01 93.5% 67.9%
3rf9B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 42.0 2.61e-01 82.6% 28.0%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 42.0 2.61e-01 84.8% 40.4%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 43.0 3.37e-01 89.1% 40.5%
1jsgA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.55 43.0 3.34e-01 89.1% 79.3%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.67e-01 93.5% 21.7%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 3.40e-01 100.0% 57.0%
5yyfA00 2.60.40.1970 Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain 0.55 46.0 3.33e-01 95.7% 94.9%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 40.0 3.19e-01 93.5% 89.1%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 44.0 2.71e-01 91.3% 28.4%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.54 44.0 3.60e-01 100.0% 87.3%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.31e-01 93.5% 83.3%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.53 39.0 3.29e-01 82.6% 51.2%
1c9rA04 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 38.0 2.99e-01 78.3% 49.5%
3r4qA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 40.0 2.95e-01 84.8% 28.8%
2jn9A01 2.40.30.80 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YkvR-like 0.53 44.0 3.64e-01 100.0% 58.2%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 45.0 3.48e-01 100.0% 90.7%
2qa1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 42.0 2.69e-01 100.0% 49.2%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 43.0 3.10e-01 100.0% 84.1%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.52 44.0 3.15e-01 100.0% 79.7%
2pe3D01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 44.0 2.80e-01 100.0% 81.7%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.51 38.0 2.86e-01 84.8% 44.4%
4n04A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 38.0 2.98e-01 82.6% 80.2%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 3.04e-01 89.1% 85.5%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.51 43.0 3.68e-01 100.0% 77.2%
4zrlA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 36.0 2.89e-01 82.6% 85.5%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.51 37.0 2.62e-01 84.8% 45.1%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 39.0 2.46e-01 91.3% 28.2%
5fbhA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 42.0 2.88e-01 100.0% 43.3%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4261760 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.82 73.0 5.65e-01 97.8% 72.6%
3507146 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 75.0 5.97e-01 100.0% 60.0%
4501723 4.8.1.45 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.81 72.0 6.80e-01 97.8% 89.1%
4349149 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 72.0 5.63e-01 97.8% 82.2%
3557649 4.8.1.20 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N 0.79 71.0 5.35e-01 100.0% 52.4%
4138935 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.77 68.0 5.76e-01 100.0% 89.3%
3396897 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 68.0 6.13e-01 100.0% 93.7%
3210653 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 62.0 5.51e-01 89.1% 67.7%
4931822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 5.97e-01 100.0% 72.3%
3256432 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.13e-01 100.0% 85.0%
3798312 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.76 67.0 5.82e-01 100.0% 78.6%
3588655 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.73 63.0 4.20e-01 100.0% 29.2%
3549321 4.11.1.5 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 0.72 61.0 4.28e-01 100.0% 38.7%
152070 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.72 58.0 4.97e-01 91.3% 61.3%
3622024 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.72 57.0 5.29e-01 89.1% 73.3%
3242479 2484.1.1.190 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.72 61.0 3.76e-01 100.0% 18.6%
3925471 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 58.0 5.38e-01 91.3% 73.3%
3995290 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.72 61.0 4.68e-01 100.0% 75.5%
3302166 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 62.0 5.55e-01 100.0% 83.1%
4956443 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.74e-01 100.0% 85.0%
3400005 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.71 59.0 5.39e-01 91.3% 80.0%
3388887 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.70 58.0 5.15e-01 91.3% 72.3%
3555043 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.70 55.0 4.70e-01 87.0% 58.7%
3928566 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 53.0 3.57e-01 82.6% 38.8%
3600258 2.1.1.28 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C 0.69 52.0 4.18e-01 87.0% 82.0%
4881914 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.69 54.0 3.56e-01 89.1% 35.8%
5001148 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.69 59.0 5.00e-01 100.0% 61.3%
3585538 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.69 57.0 4.60e-01 100.0% 57.0%
3793962 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.69 57.0 4.73e-01 100.0% 63.3%
3856185 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.69 54.0 4.69e-01 87.0% 64.3%
4932514 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.68 58.0 4.36e-01 100.0% 60.8%
4928794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.27e-01 84.8% 100.0%
3319851 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.67 55.0 3.68e-01 100.0% 38.6%
4395103 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 58.0 4.71e-01 100.0% 52.2%
1196305 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 55.0 3.32e-01 93.5% 19.6%
3278337 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.66 55.0 3.68e-01 97.8% 36.4%
3954938 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.08e-01 100.0% 83.1%
3389948 4.8.1.29 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SH3_AEBP2_C 0.66 52.0 4.09e-01 87.0% 43.0%
3540753 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.66 55.0 3.34e-01 93.5% 29.3%
3679125 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 52.0 3.50e-01 87.0% 28.9%
3883849 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.66 54.0 3.32e-01 93.5% 29.3%
4318569 219.1.1.41 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.65 56.0 3.34e-01 100.0% 17.5%
3989485 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.64 50.0 4.98e-01 100.0% 86.0%
4863266 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.64 54.0 4.94e-01 100.0% 75.4%
4388250 5.1.4.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Reg_prop 0.64 52.0 3.15e-01 93.5% 19.4%
3600626 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 51.0 4.03e-01 91.3% 94.0%
4968409 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.64 51.0 4.00e-01 89.1% 84.0%
4021643 719.2.1.0 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.63 48.0 3.85e-01 89.1% 82.9%
3273842 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 48.0 4.00e-01 84.8% 89.4%
2653812 6107.1.1.2 a+b two layers › a+b domain in platelet binding protein GspB › a+b domain in platelet binding protein GspB › a+b domain in platelet binding protein GspB › aRib 0.63 47.0 3.86e-01 82.6% 84.1%
9252 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.63 54.0 4.06e-01 100.0% 77.8%
3277727 4.8.1.43 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.63 55.0 4.32e-01 97.8% 64.2%
4970357 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.62 53.0 2.96e-01 97.8% 10.6%
3187470 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.62 54.0 3.37e-01 100.0% 48.7%
4389679 4959.1.1.1 a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 0.62 47.0 3.51e-01 84.8% 33.3%
3294025 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 50.0 4.85e-01 95.7% 96.4%
3401931 220.1.1.184 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.62 48.0 3.91e-01 89.1% 52.6%
4933970 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.62 48.0 4.48e-01 87.0% 95.0%
3267168 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 46.0 3.73e-01 82.6% 87.4%
3641913 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.62 50.0 4.32e-01 89.1% 70.7%
3390463 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.62 50.0 4.55e-01 93.5% 73.8%
4942999 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.62 54.0 3.58e-01 100.0% 52.8%
4945078 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 52.0 3.70e-01 100.0% 70.3%
None 0.61 49.0 2.74e-01 93.5% 29.2%
2552766 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.61 51.0 3.60e-01 97.8% 87.1%
9221 2003.1.2.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N 0.60 50.0 3.10e-01 97.8% 88.4%
3903053 220.1.1.162 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31014 0.60 50.0 3.49e-01 100.0% 63.5%
1391704 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.60 52.0 3.82e-01 100.0% 81.0%
3659736 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.60 48.0 3.19e-01 93.5% 34.1%
3739528 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.60 48.0 3.21e-01 93.5% 86.3%
3219127 2003.1.2.130 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Pyr_redox_2, NAD_binding_8 0.60 53.0 3.03e-01 100.0% 27.2%
3238934 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 46.0 3.51e-01 89.1% 35.8%
3792511 206.1.1.72 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.58 46.0 2.86e-01 97.8% 26.5%
3530891 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 47.0 3.73e-01 100.0% 54.1%
3369818 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.56 46.0 4.19e-01 95.7% 86.2%
5057130 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.56 46.0 3.45e-01 93.5% 90.4%
4138644 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.55 45.0 2.90e-01 93.5% 78.7%
4115704 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 47.0 4.06e-01 100.0% 77.3%
5029083 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 39.0 2.96e-01 89.1% 98.0%
4054729 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.52 44.0 3.83e-01 100.0% 81.3%
4016874 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.50 41.0 2.58e-01 100.0% 43.5%