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asb135

Euk-Vir

Agrotis_segetum_nucleopolyhedrovirus_B

asb135__YP_009112696__Agrotis_segetum_nucleopolyhedrovirus_B__1580580

Identity

Accession:
YP_009112696 ↗
Protein ID:
asb135
Kingdom:
euk

Quality

80.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Agrotis_segetum_nucleopolyhedrovirus_B

TaxID: 1580580

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-109
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04242.19 best DUF424 56.4 4.10e-15 85.7% 97.8%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xxmC01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.59 33.0 3.80e-01 79.0% 75.7%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.90e-01 100.0% 87.7%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 4.41e-01 91.4% 95.9%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.22e-01 95.2% 42.3%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 31.0 3.34e-01 79.0% 65.5%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.54 26.0 3.36e-01 96.2% 93.5%
3hi2B00 3.30.2310.40 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › 0.54 44.0 4.58e-01 90.5% 95.9%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 30.0 3.62e-01 96.2% 93.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.53 26.0 3.31e-01 93.3% 86.5%
1usyC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 41.0 3.05e-01 100.0% 31.8%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.52 36.0 3.63e-01 81.9% 69.8%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.93e-01 89.5% 88.8%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.91e-01 96.2% 25.3%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 39.0 3.48e-01 81.9% 90.9%
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 44.0 2.96e-01 100.0% 60.3%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4993192 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 39.0 4.84e-01 86.7% 90.8%
4964453 304.8.1.119 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF5778 0.65 44.0 4.18e-01 85.7% 58.4%
4000819 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.61 31.0 3.68e-01 96.2% 71.4%
3778012 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.60 32.0 3.52e-01 96.2% 63.5%
3402874 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.60 31.0 3.87e-01 96.2% 81.5%
3795071 221.1.1.196 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › WD40 0.60 43.0 2.95e-01 97.1% 21.1%
3992026 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.58 31.0 3.81e-01 96.2% 83.1%
4524863 506.2.1.2 ↗ beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.56 33.0 3.43e-01 80.0% 63.2%
3990496 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.55 30.0 3.52e-01 99.0% 77.1%
3934185 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 45.0 4.13e-01 90.5% 91.4%
3399941 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 45.0 4.32e-01 98.1% 77.5%
3679683 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 40.0 2.35e-01 97.1% 9.8%
3719036 59.1.1.0 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.54 36.0 4.08e-01 81.0% 97.2%
4228771 506.2.1.0 ↗ beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain 0.54 32.0 2.80e-01 82.9% 37.5%
3189419 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.54 39.0 2.91e-01 100.0% 28.6%
None — 0.54 33.0 2.17e-01 100.0% 13.8%
3728321 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.54 40.0 2.95e-01 100.0% 30.8%
4269073 2004.1.1.791 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_bR2 0.53 37.0 2.80e-01 72.4% 93.7%
3847019 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 45.0 3.15e-01 95.2% 37.1%
3733331 708.1.2.10 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 0.52 38.0 3.76e-01 80.0% 99.1%
4971643 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 41.0 3.18e-01 88.6% 98.8%
3535431 5.1.3.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.51 44.0 3.24e-01 95.2% 52.9%
3785876 5.1.4.262 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.51 43.0 2.95e-01 95.2% 38.7%
3888294 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 3.11e-01 95.2% 38.7%
3872568 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.50 36.0 3.10e-01 100.0% 46.5%
3419350 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.50 43.0 3.37e-01 95.2% 66.8%