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attachment_protein

Euk-Vir

Mapuera_orthorubulavirus

attachment_protein__ABQ23937__Mapuera_orthorubulavirus__2560582

Identity

Accession:
ABQ23937 ↗
Protein ID:
attachment_protein
Kingdom:
euk

Quality

83.0 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Orthorubulavirus› Orthorubulavirus_mapueraense

TaxID: 2560582

Cluster

View cluster (61 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 61-112
PDB
D2 medium residues 146-159_473-539
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 41.3 1.10e-10 86.4% 11.4%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.93 88.0 5.31e-01 100.0% 88.3%
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.82 77.0 4.69e-01 100.0% 87.4%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.81 73.0 4.46e-01 95.1% 90.6%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.80 75.0 4.61e-01 100.0% 87.9%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.76 71.0 4.39e-01 100.0% 89.6%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.73 57.0 3.59e-01 82.7% 32.3%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.71 58.0 3.76e-01 88.9% 90.9%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.69 55.0 3.56e-01 86.4% 89.2%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 58.0 3.70e-01 100.0% 85.6%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.63 56.0 3.60e-01 100.0% 84.4%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 45.0 2.94e-01 80.2% 19.9%
6dxwA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.60 46.0 3.33e-01 82.7% 52.4%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 53.0 3.41e-01 97.5% 30.2%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 3.80e-01 100.0% 64.8%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 41.0 3.50e-01 82.7% 44.9%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.57 37.0 3.46e-01 75.3% 52.9%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.56 43.0 3.78e-01 82.7% 55.3%
1ukxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 38.0 3.27e-01 71.6% 79.6%
4ba0A04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 38.0 3.10e-01 70.4% 79.2%
3l9rA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.55 39.0 3.12e-01 76.5% 93.7%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 42.0 3.36e-01 85.2% 75.6%
6cz7A01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.54 33.0 3.66e-01 86.4% 80.6%
4ffgA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 41.0 2.74e-01 82.7% 50.0%
3vgzC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 41.0 2.78e-01 85.2% 89.8%
4fvkA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 47.0 3.07e-01 100.0% 85.3%
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.53 37.0 2.99e-01 74.1% 91.1%
2a8eA00 3.30.930.20 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 0.53 42.0 3.12e-01 86.4% 65.2%
3d2uE01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.53 38.0 2.91e-01 74.1% 94.1%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 46.0 3.03e-01 100.0% 52.1%
6fhvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.54e-01 79.0% 100.0%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.51 40.0 4.01e-01 85.2% 91.7%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1563144 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.93 88.0 5.23e-01 100.0% 80.5%
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.84 78.0 4.70e-01 100.0% 80.2%
4889672 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.83 78.0 4.75e-01 100.0% 87.4%
2527935 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.79 75.0 4.56e-01 100.0% 87.9%
2833528 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.78 73.0 4.39e-01 100.0% 77.5%
1519176 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.76 71.0 4.37e-01 100.0% 89.4%
5003966 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 41.0 4.56e-01 71.6% 75.4%
3326109 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.64 48.0 4.11e-01 81.5% 50.0%
3258445 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.62 35.0 4.53e-01 79.0% 100.0%
4138644 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.61 40.0 2.89e-01 79.0% 23.0%
3974671 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.61 39.0 3.89e-01 70.4% 62.4%
3570251 5.1.4.288 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.61 47.0 2.92e-01 82.7% 21.3%
134234 809.1.1.2 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › BLIP 0.61 40.0 4.02e-01 70.4% 66.3%
3272565 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 47.0 2.96e-01 82.7% 26.7%
3830535 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.60 51.0 3.49e-01 95.1% 89.3%
3993869 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.59 41.0 3.12e-01 79.0% 30.3%
3824321 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 41.0 4.00e-01 72.8% 65.6%
3487826 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 45.0 2.82e-01 82.7% 22.3%
3506982 7525.1.1.2 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.57 41.0 2.74e-01 76.5% 95.4%
3271615 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 41.0 2.62e-01 81.5% 14.3%
3832391 5.1.4.317 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, Beta-prop_NOL10_N 0.57 43.0 2.80e-01 81.5% 18.7%
3927439 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.55 38.0 2.99e-01 79.0% 32.6%
3687101 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 42.0 2.87e-01 82.7% 34.3%
3708150 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 43.0 2.82e-01 86.4% 92.4%
3597078 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.54 41.0 3.16e-01 82.7% 49.2%
4021054 4252.1.1.3 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.54 37.0 2.97e-01 71.6% 98.8%
3708068 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 3.33e-01 100.0% 66.3%
3908724 71.1.1.1 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.52 36.0 2.78e-01 71.6% 85.0%
3303238 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.51 39.0 3.45e-01 81.5% 57.5%
5009292 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 37.0 2.59e-01 75.3% 78.3%
3269464 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 38.0 3.48e-01 80.2% 72.7%
D3 medium residues 160-220_540-579
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009508497__Avian_paramyxovirus_14__1928005__D160-253_538-557
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 87.4 1.10e-24 60.4% 11.2%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.94 89.0 5.55e-01 98.0% 93.7%
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.91 87.0 5.42e-01 99.0% 92.6%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.86 82.0 5.18e-01 100.0% 92.3%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.80 75.0 4.84e-01 100.0% 96.6%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 56.0 3.92e-01 99.0% 92.7%
1s3rA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.60 33.0 4.20e-01 85.1% 100.0%
4n4rB00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.57 40.0 3.48e-01 71.3% 65.6%
6nobA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 48.0 3.29e-01 97.0% 95.3%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 31.0 3.21e-01 74.3% 60.8%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 37.0 3.45e-01 72.3% 77.3%
6lofA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 44.0 3.78e-01 91.1% 64.2%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 37.0 3.20e-01 72.3% 80.6%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 42.0 3.36e-01 93.1% 91.5%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 36.0 3.40e-01 73.3% 85.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1563144 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.97 92.0 5.63e-01 98.0% 85.4%
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.93 89.0 5.50e-01 100.0% 85.2%
3062082 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.85 79.0 5.02e-01 99.0% 92.6%
3707549 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.66 52.0 3.44e-01 85.1% 94.5%
2045451 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.65 57.0 3.87e-01 95.0% 91.5%
3232476 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.63 44.0 4.51e-01 94.1% 75.0%
3513530 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 44.0 4.09e-01 94.1% 57.7%
3509197 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 42.0 4.52e-01 93.1% 87.1%
3578264 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 45.0 4.44e-01 100.0% 76.4%
3495018 11.12.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like 0.55 44.0 3.43e-01 86.1% 88.6%
4037664 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.55 39.0 3.68e-01 80.2% 60.8%
3451695 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 36.0 3.83e-01 75.2% 76.7%
3372466 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 38.0 4.26e-01 79.2% 97.3%
297731 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.53 44.0 3.49e-01 91.1% 47.9%
4219295 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.53 38.0 3.47e-01 80.2% 56.9%
3765831 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 38.0 3.66e-01 76.2% 87.0%
3392553 11.1.1.673 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N 0.51 38.0 3.75e-01 78.2% 86.4%
4593266 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 35.0 3.89e-01 91.1% 96.0%
3612141 719.1.1.5 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.51 40.0 3.62e-01 84.2% 84.8%
3990808 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.75e-01 78.2% 95.2%
3579552 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.51 29.0 3.55e-01 82.2% 89.2%
3503973 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 37.0 3.46e-01 78.2% 69.2%
D4 medium residues 221-339_355-380
PDB
Domain cluster: rep: haemagglutinin_protein__YP_009094449__Porcine_respirovirus_1__1357321__D235-405
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 126.2 2.00e-36 100.0% 28.1%
D5 medium residues 340-354_381-472
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009505446__Bat_Paramyxovirus_Epo_spe_AR1_DRC_2009__1112597__D374-479
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 92.1 4.30e-26 93.5% 16.1%