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attachment_protein

Euk-Vir

Achimota_virus_1

attachment_protein__YP_009094457__Achimota_virus_1__1261100

Identity

Accession:
YP_009094457 ↗
Protein ID:
attachment_protein
Kingdom:
euk

Quality

78.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Pararubulavirus› Achimota_virus_1

TaxID: 1261100

Cluster

View cluster (61 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 169-205_490-595
PDB
Domain cluster: rep: attachment_glycoprotein__YP_009094086__Cedar_virus__1221391__D199-232_532-622
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 55.6 4.70e-15 72.0% 17.2%
PF00423.27 HN 27.9 1.20e-06 25.2% 5.8%
D2 medium residues 206-330
PDB
Domain cluster: rep: hemagglutinin-neuraminidase__YP_009094497__Tuhoko_virus_1__798072__D178-291
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 79.1 3.60e-22 100.0% 23.8%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.91 88.0 5.73e-01 100.0% 28.0%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.90 83.0 5.45e-01 100.0% 27.3%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.89 84.0 5.59e-01 100.0% 29.5%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.84 80.0 5.37e-01 100.0% 30.8%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.82 77.0 5.23e-01 100.0% 31.7%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.72 64.0 4.43e-01 100.0% 30.1%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.68 52.0 3.87e-01 100.0% 32.5%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 53.0 3.97e-01 100.0% 34.7%
7qzqA01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.65 51.0 3.75e-01 100.0% 31.5%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.62 30.0 3.44e-01 89.6% 59.6%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 55.0 3.82e-01 100.0% 44.2%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 54.0 3.94e-01 100.0% 37.8%
3c7fA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 54.0 3.94e-01 100.0% 39.7%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 30.0 3.46e-01 75.2% 64.1%
5h66A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 29.0 2.59e-01 80.8% 35.8%
3sokB00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.52 36.0 3.49e-01 71.2% 69.0%
1zhxA03 2.40.160.120 Mainly Beta › Beta Barrel › Porin › 0.51 39.0 3.45e-01 81.6% 54.5%
1ejfA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 34.0 3.55e-01 84.0% 74.5%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2541822 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.94 90.0 7.65e-01 100.0% 66.5%
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.90 86.0 5.54e-01 100.0% 25.7%
4889672 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.89 85.0 5.64e-01 100.0% 29.2%
1563144 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.89 85.0 5.46e-01 100.0% 25.4%
1112626 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.88 84.0 5.55e-01 100.0% 29.1%
3062082 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.87 83.0 5.49e-01 100.0% 29.3%
3062081 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.86 81.0 5.41e-01 100.0% 29.6%
2527935 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.85 80.0 5.34e-01 100.0% 29.5%
1519176 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.84 80.0 5.37e-01 100.0% 30.5%
4881991 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.83 78.0 5.19e-01 100.0% 29.0%
2093820 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.81 77.0 5.12e-01 100.0% 29.3%
2833528 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.81 76.0 4.99e-01 100.0% 26.8%
4130753 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.77 72.0 5.10e-01 100.0% 40.6%
3017638 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.72 67.0 4.44e-01 100.0% 27.3%
1196318 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.69 63.0 4.32e-01 100.0% 29.2%
None — 0.65 49.0 3.38e-01 100.0% 24.9%
3857554 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 49.0 3.36e-01 100.0% 24.6%
3483569 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 56.0 3.88e-01 99.2% 43.4%
3827703 5.1.4.550 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.62 50.0 3.76e-01 100.0% 34.8%
None — 0.61 48.0 3.60e-01 98.4% 33.3%
3622698 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 55.0 4.00e-01 100.0% 48.5%
3632913 5.1.4.249 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 0.59 51.0 3.46e-01 94.4% 42.3%
3614253 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.58 49.0 3.50e-01 92.0% 53.6%
None — 0.54 49.0 3.54e-01 97.6% 37.6%
2060362 2004.1.1.481 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 0.53 29.0 2.59e-01 80.8% 35.8%
3892091 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 30.0 2.65e-01 80.8% 38.4%
4432262 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.51 30.0 3.13e-01 85.6% 60.8%
D3 medium residues 331-489
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009508497__Avian_paramyxovirus_14__1928005__D254-485
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 117.6 8.00e-34 100.0% 26.2%