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attachment_protein
Euk-VirAchimota_virus_2
attachment_protein__YP_009094465__Achimota_virus_2__1261101
Identity
- Accession:
- YP_009094465 ↗
- Protein ID:
- attachment_protein
- Kingdom:
- euk
Quality
79.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Pararubulavirus›
Achimota_virus_2
TaxID: 1261101
Cluster
View cluster (61 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 88-143
D2
medium
residues 144-171_464-583
Domain cluster:
rep: attachment_glycoprotein__YP_009094086__Cedar_virus__1221391__D199-232_532-622
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00423.27 best | HN | 73.4 | 2.00e-20 | 93.9% | 20.0% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z4vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.85 | 82.0 | 5.59e-01 | 100.0% | 96.2% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.81 | 77.0 | 5.32e-01 | 100.0% | 95.7% |
| 2vsmA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.79 | 76.0 | 5.27e-01 | 99.3% | 99.3% |
| 4uf7B00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.79 | 75.0 | 5.28e-01 | 100.0% | 98.1% |
| 1v3eA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.79 | 75.0 | 5.23e-01 | 100.0% | 95.8% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.67 | 27.0 | 4.37e-01 | 97.3% | 100.0% |
| 2jkbA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.64 | 55.0 | 4.03e-01 | 90.5% | 99.2% |
| 1so7A00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.64 | 56.0 | 4.17e-01 | 93.9% | 100.0% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.63 | 57.0 | 4.24e-01 | 100.0% | 93.8% |
| 2xziA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.63 | 57.0 | 4.20e-01 | 99.3% | 97.9% |
| 2rkcA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.61 | 55.0 | 4.01e-01 | 97.3% | 99.2% |
| 8gn6A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.60 | 52.0 | 3.89e-01 | 91.2% | 99.7% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.59 | 54.0 | 4.05e-01 | 99.3% | 95.2% |
| 1pn2B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 30.0 | 3.05e-01 | 99.3% | 49.3% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 49.0 | 3.43e-01 | 95.3% | 99.4% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.54 | 31.0 | 3.23e-01 | 96.6% | 60.0% |
| 5tf2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 3.46e-01 | 90.5% | 100.0% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 31.0 | 3.14e-01 | 99.3% | 60.4% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1563144 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.85 | 82.0 | 5.46e-01 | 100.0% | 87.6% |
| 152420 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.81 | 77.0 | 5.20e-01 | 100.0% | 87.9% |
| 4889672 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.80 | 77.0 | 5.30e-01 | 100.0% | 98.2% |
| 1112626 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.80 | 76.0 | 5.23e-01 | 100.0% | 93.4% |
| 2527935 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.79 | 76.0 | 5.25e-01 | 100.0% | 96.3% |
| 1519176 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.79 | 75.0 | 5.27e-01 | 100.0% | 97.8% |
| 2833528 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.79 | 76.0 | 5.08e-01 | 100.0% | 83.9% |
| 3062081 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.73 | 68.0 | 4.80e-01 | 100.0% | 96.3% |
| 2093820 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.73 | 68.0 | 4.78e-01 | 100.0% | 98.2% |
| 3062082 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.73 | 68.0 | 4.77e-01 | 100.0% | 95.2% |
| 4881991 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.71 | 66.0 | 4.64e-01 | 100.0% | 95.0% |
| 2702071 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.63 | 57.0 | 4.24e-01 | 99.3% | 92.5% |
| 2672137 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.63 | 57.0 | 4.22e-01 | 100.0% | 93.4% |
| 4879141 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.62 | 56.0 | 4.15e-01 | 100.0% | 93.5% |
| 3110491 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.62 | 56.0 | 4.12e-01 | 100.0% | 94.1% |
| 3537640 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 45.0 | 3.31e-01 | 76.4% | 36.5% |
| 1196318 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.61 | 56.0 | 3.99e-01 | 99.3% | 96.0% |
| 4861416 | 5.1.1.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 | 0.60 | 44.0 | 3.30e-01 | 78.4% | 31.0% |
| 5054725 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.60 | 31.0 | 3.39e-01 | 95.9% | 60.8% |
| 5035135 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 52.0 | 3.73e-01 | 92.6% | 100.0% |
| 1110926 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.59 | 53.0 | 4.05e-01 | 99.3% | 95.2% |
| 3032521 | 5.1.3.26 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 | 0.59 | 51.0 | 3.79e-01 | 90.5% | 84.1% |
| 4932446 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.58 | 29.0 | 3.26e-01 | 95.3% | 59.2% |
| 4024738 | 220.1.1.243 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30062 | 0.57 | 34.0 | 4.00e-01 | 94.6% | 82.9% |
| 3517705 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 46.0 | 3.24e-01 | 87.2% | 60.8% |
| 5055711 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.57 | 43.0 | 3.20e-01 | 79.1% | 44.1% |
| 3720671 | 222.1.1.27 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 | 0.56 | 33.0 | 3.09e-01 | 100.0% | 46.1% |
| 3962890 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.56 | 30.0 | 3.23e-01 | 93.2% | 60.0% |
| 3996119 | 5.1.4.417 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › KNTC1_N | 0.56 | 46.0 | 3.43e-01 | 87.2% | 87.6% |
| 3620886 | 5.1.4.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 | 0.55 | 42.0 | 2.95e-01 | 79.7% | 40.2% |
| 3626903 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 48.0 | 3.69e-01 | 92.6% | 100.0% |
| 3490202 | 5.1.4.55 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ELYS-bb | 0.53 | 45.0 | 3.06e-01 | 91.9% | 85.2% |
| 3617004 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 31.0 | 3.51e-01 | 94.6% | 75.7% |
| 4652688 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.52 | 29.0 | 3.01e-01 | 98.0% | 57.1% |
D3
medium
residues 172-300
Domain cluster:
rep: hemagglutinin-neuraminidase__YP_009094497__Tuhoko_virus_1__798072__D178-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00423.27 best | HN | 97.3 | 1.10e-27 | 99.2% | 21.2% |
D4
medium
residues 301-463
Domain cluster:
rep: hemagglutinin-neuraminidase_protein__YP_009508497__Avian_paramyxovirus_14__1928005__D254-485
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00423.27 best | HN | 128.9 | 3.00e-37 | 100.0% | 26.6% |