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baculovirus_repeated_ORF
Euk-VirSpodoptera_exempta_nucleopolyhedrovirus
baculovirus_repeated_ORF__YP_010086446__Spodoptera_exempta_nucleopolyhedrovirus__1242863
Identity
- Accession:
- YP_010086446 ↗
- Protein ID:
- baculovirus_repeated_ORF
- Kingdom:
- euk
Quality
58.3
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_exempta_nucleopolyhedrovirus
TaxID: 1242863
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-108
Domain cluster:
rep: Bro25__YP_009702174__Heliothis_virescens_ascovirus_3g__1246651__D4-128
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 35.3 | 2.00e-08 | 83.7% | 68.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hplA00 | 3.10.260.40 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › BCL-6 corepressor, PCGF1 binding domain | 0.60 | 50.0 | 4.73e-01 | 93.5% | 77.9% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 32.0 | 3.28e-01 | 100.0% | 53.9% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.54 | 29.0 | 3.29e-01 | 70.7% | 67.6% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 44.0 | 3.94e-01 | 95.7% | 82.4% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.50 | 34.0 | 3.33e-01 | 96.7% | 62.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.86 | 63.0 | 5.91e-01 | 100.0% | 63.6% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.86 | 56.0 | 5.42e-01 | 93.5% | 61.0% |
| 1790169 | 101.1.9.7 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Baculo_PEP_N | 0.82 | 62.0 | 5.93e-01 | 100.0% | 68.9% |
| 3616626 | 101.1.9.25 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › INI1_DNA-bd | 0.65 | 49.0 | 5.35e-01 | 90.2% | 98.7% |
| 5082246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 30.0 | 3.61e-01 | 100.0% | 66.7% |
| 3237609 | 101.1.2.502 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25880 | 0.56 | 39.0 | 3.65e-01 | 71.7% | 64.3% |
| 4181736 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.53 | 45.0 | 3.77e-01 | 94.6% | 87.9% |
| 4297807 | 850.1.1.2 ↗ | a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 | 0.53 | 37.0 | 3.69e-01 | 97.8% | 69.0% |
| 3606192 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 36.0 | 2.46e-01 | 73.9% | 66.3% |
| 3599256 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.51 | 37.0 | 3.62e-01 | 77.2% | 76.0% |
D2
high
residues 113-156