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baculovirus_repeated_namegeneORF
Euk-VirCondylorrhiza_vestigialis_MNPV
baculovirus_repeated_namegeneORF__YP_009118528__Condylorrhiza_vestigialis_MNPV__1592576
Identity
- Accession:
- YP_009118528 ↗
- Protein ID:
- baculovirus_repeated_namegeneORF
- Kingdom:
- euk
Quality
77.6
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Condylorrhiza_vestigialis_mutiple_nucleopolyhedrovirus
TaxID: 1592576
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-166
Domain cluster:
rep: Bro25__YP_009702174__Heliothis_virescens_ascovirus_3g__1246651__D4-128
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 66.1 | 5.10e-18 | 69.1% | 92.7% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.65 | 43.0 | 4.86e-01 | 71.2% | 88.7% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 23.0 | 3.12e-01 | 89.2% | 84.1% |
| 3zmdA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 32.0 | 3.14e-01 | 91.4% | 56.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.81 | 56.0 | 6.67e-01 | 76.3% | 99.0% |
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.79 | 55.0 | 6.14e-01 | 88.5% | 89.1% |
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.76 | 51.0 | 5.78e-01 | 86.3% | 90.5% |
| 4008588 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.67 | 48.0 | 5.37e-01 | 74.1% | 100.0% |
| 3885964 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 52.0 | 5.21e-01 | 82.7% | 91.4% |
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.63 | 49.0 | 5.30e-01 | 84.2% | 100.0% |
| 3983963 | 101.1.9.41 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N | 0.62 | 45.0 | 5.07e-01 | 84.9% | 99.0% |
| 3978692 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.60 | 50.0 | 4.90e-01 | 88.5% | 83.3% |
| 5037381 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.59 | 23.0 | 3.64e-01 | 90.6% | 98.0% |
| 3475523 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 35.0 | 3.31e-01 | 76.3% | 50.9% |
| 5070992 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.52 | 21.0 | 2.94e-01 | 73.4% | 76.7% |
| 3587129 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 20.0 | 2.78e-01 | 82.0% | 69.2% |
D2
high
residues 174-260
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 58.8 | 9.00e-16 | 94.2% | 91.8% |
| PF13455.13 | MUG113 | 65.3 | 8.30e-18 | 75.9% | 90.4% |