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beta-beta-alpha_motif_protein
Euk-VirRanid_herpesvirus_3
beta-beta-alpha_motif_protein__YP_009362321__Ranid_herpesvirus_3__1987509
Identity
- Accession:
- YP_009362321 ↗
- Protein ID:
- beta-beta-alpha_motif_protein
- Kingdom:
- euk
Quality
70.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Batravirus›
Ranid_herpesvirus_3
TaxID: 1987509
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-161
Domain cluster:
rep: fibrinogen_C-terminal_domain-like_motif_protein__YP_009362324__Ranid_herpesvirus_3__1987509__D43-171
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 45.0 | 3.26e-01 | 79.7% | 94.2% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 36.0 | 4.03e-01 | 75.6% | 84.3% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 48.0 | 4.18e-01 | 91.1% | 67.2% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.55 | 38.0 | 4.02e-01 | 70.7% | 100.0% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.55 | 36.0 | 3.99e-01 | 75.6% | 81.2% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 41.0 | 3.43e-01 | 80.5% | 84.1% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 40.0 | 3.52e-01 | 78.9% | 80.5% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.54 | 33.0 | 3.61e-01 | 74.8% | 72.4% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.51 | 39.0 | 3.76e-01 | 80.5% | 88.8% |
| 4o2wD00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.51 | 38.0 | 2.77e-01 | 78.0% | 96.4% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 43.0 | 3.88e-01 | 95.9% | 65.5% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 40.0 | 4.04e-01 | 95.9% | 84.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3169459 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.69 | 52.0 | 3.49e-01 | 78.0% | 59.6% |
| 3990149 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.61 | 40.0 | 4.34e-01 | 83.7% | 79.6% |
| None | — | 0.60 | 43.0 | 3.08e-01 | 73.2% | 44.9% | |
| 5046652 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.53 | 47.0 | 4.14e-01 | 100.0% | 73.5% |
| 4479376 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.50 | 32.0 | 3.33e-01 | 74.8% | 67.8% |
| 4427813 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.50 | 31.0 | 3.35e-01 | 74.8% | 72.4% |
D2
high
residues 201-359
Domain cluster:
rep: isomerase_motif_protein__YP_009362317__Ranid_herpesvirus_3__1987509__D187-355