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bro
Euk-VirPeridroma_alphabaculovirus
bro__YP_009049843__Peridroma_alphabaculovirus__1346829
Identity
- Accession:
- YP_009049843 ↗
- Protein ID:
- bro
- Kingdom:
- euk
Quality
70.7
mean pLDDT
Taxonomy
TaxID: 1346829
Cluster
View cluster (47 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 347-448
Domain cluster:
rep: BV_ODV-E26__YP_009666490__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D138-232
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12299.14 best | DUF3627 | 52.1 | 7.80e-14 | 70.6% | 74.2% |
D2
medium
residues 70-137_187-224
Domain cluster:
rep: MH268168.1__AWY10457.1__PFP1_07__00007__D2-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 92.0 | 4.00e-26 | 83.0% | 97.9% |
D3
medium
residues 225-281
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3td9A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 41.0 | 2.92e-01 | 75.4% | 94.5% |
| 6vg5A00 | 1.10.10.930 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 46.0 | 4.14e-01 | 87.7% | 72.8% |
| 3axiA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 46.0 | 2.73e-01 | 89.5% | 34.4% |
| 3d34B01 | 2.60.40.2130 | Mainly Beta › Sandwich › Immunoglobulin-like › F-spondin domain | 0.57 | 41.0 | 2.98e-01 | 77.2% | 64.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3891438 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.60 | 41.0 | 3.42e-01 | 70.2% | 47.4% |
| 3211207 | 101.1.1.482 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF29683 | 0.60 | 48.0 | 4.51e-01 | 87.7% | 100.0% |
| 3825199 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 50.0 | 3.48e-01 | 100.0% | 89.3% |
| 4029825 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.58 | 39.0 | 3.41e-01 | 70.2% | 54.8% |
| 4046675 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.55 | 45.0 | 4.09e-01 | 98.2% | 83.5% |
| 3590191 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.53 | 41.0 | 3.16e-01 | 84.2% | 43.2% |
D4
medium
residues 282-341