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bro
Euk-VirSpodoptera_frugiperda_granulovirus
bro__YP_009121837__Spodoptera_frugiperda_granulovirus__307454
Identity
- Accession:
- YP_009121837 ↗
- Protein ID:
- bro
- Kingdom:
- euk
Quality
78.3
mean pLDDT
Taxonomy
TaxID: 307454
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-120
Domain cluster:
rep: MH268168.1__AWY10457.1__PFP1_07__00007__D2-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 87.6 | 9.90e-25 | 84.0% | 100.0% |
D2
high
residues 136-226
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 56.9 | 3.40e-15 | 97.8% | 96.9% |
| PF13455.13 | MUG113 | 66.8 | 2.90e-18 | 78.0% | 97.3% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oq2A00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 40.0 | 3.94e-01 | 86.8% | 60.6% |
| 2yz0A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.59 | 40.0 | 3.53e-01 | 100.0% | 45.7% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.57 | 29.0 | 3.19e-01 | 97.8% | 58.6% |
| 2gbsA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.55 | 45.0 | 3.90e-01 | 90.1% | 94.5% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 3.76e-01 | 93.4% | 52.2% |
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.54 | 35.0 | 3.77e-01 | 73.6% | 76.9% |
| 3getA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 37.0 | 3.67e-01 | 98.9% | 71.3% |
| 1y5oA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 36.0 | 3.33e-01 | 100.0% | 59.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3613416 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.84 | 78.0 | 7.04e-01 | 100.0% | 83.3% |
| 3597677 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.84 | 78.0 | 7.39e-01 | 100.0% | 93.3% |
| 3689357 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.83 | 78.0 | 6.22e-01 | 100.0% | 64.2% |
| 3946107 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.82 | 78.0 | 7.67e-01 | 100.0% | 97.9% |
| 4016088 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.80 | 74.0 | 7.04e-01 | 100.0% | 98.1% |
| 3989300 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.77 | 70.0 | 6.61e-01 | 100.0% | 92.7% |
| 3611689 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.72 | 67.0 | 5.26e-01 | 100.0% | 61.1% |
| 3596216 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.72 | 66.0 | 5.42e-01 | 100.0% | 68.8% |
| 3885877 | 11.1.6.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › UPA-FIIND | 0.60 | 52.0 | 4.72e-01 | 98.9% | 82.3% |
| 3723442 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.60 | 40.0 | 3.61e-01 | 100.0% | 48.5% |
| 4031101 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 45.0 | 4.05e-01 | 86.8% | 100.0% |
| 21948 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.56 | 44.0 | 3.95e-01 | 86.8% | 100.0% |
| 4028705 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.56 | 37.0 | 3.46e-01 | 100.0% | 52.5% |
| 3730822 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 41.0 | 3.83e-01 | 100.0% | 61.7% |
| 3420394 | 108.1.1.14 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF_assoc_2 | 0.52 | 36.0 | 3.69e-01 | 90.1% | 74.4% |
| 3455885 | 101.1.9.118 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Auxin_inducible | 0.52 | 35.0 | 3.95e-01 | 98.9% | 100.0% |
| 3484816 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 42.0 | 3.75e-01 | 95.6% | 61.5% |