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c1q-like_domain_motif-containing_protein
Euk-VirPandoravirus_inopinatum
c1q-like_domain_motif-containing_protein__YP_009119468__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009119468 ↗
- Protein ID:
- c1q-like_domain_motif-containing_protein
- Kingdom:
- euk
Quality
87.0
mean pLDDT
Cluster
View cluster (159 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-34_72-149
Domain cluster:
representative
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 73.0 | 6.63e-01 | 96.9% | 90.7% |
| 2xomA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.71 | 62.0 | 5.43e-01 | 95.9% | 94.5% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 64.0 | 5.80e-01 | 100.0% | 93.1% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.70 | 62.0 | 5.42e-01 | 95.9% | 85.8% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.70 | 62.0 | 5.13e-01 | 96.9% | 86.2% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 64.0 | 5.63e-01 | 100.0% | 92.0% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 60.0 | 5.31e-01 | 95.9% | 93.0% |
| 3rwnB00 | 2.60.120.1120 | Mainly Beta › Sandwich › Jelly Rolls › Sf6-type phage tail needle knob | 0.69 | 60.0 | 5.17e-01 | 96.9% | 87.0% |
| 1wckA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 63.0 | 5.56e-01 | 99.0% | 86.8% |
| 1lnsA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 61.0 | 4.93e-01 | 99.0% | 84.4% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 59.0 | 4.76e-01 | 95.9% | 80.1% |
| 4fffA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.67 | 59.0 | 5.09e-01 | 96.9% | 91.5% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 59.0 | 5.19e-01 | 96.9% | 97.2% |
| 4d8mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 58.0 | 4.80e-01 | 95.9% | 84.7% |
| 7zkpA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.66 | 57.0 | 4.64e-01 | 95.9% | 97.8% |
| 4w8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 57.0 | 4.84e-01 | 95.9% | 84.6% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 56.0 | 4.16e-01 | 96.9% | 61.5% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.65 | 57.0 | 4.79e-01 | 96.9% | 81.5% |
| 1zx5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 45.0 | 4.78e-01 | 93.8% | 84.3% |
| 2jqzA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.64 | 47.0 | 4.24e-01 | 76.3% | 86.3% |
| 1yllA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 4.90e-01 | 94.8% | 82.6% |
| 5fuiA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 55.0 | 5.10e-01 | 95.9% | 96.0% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 3.94e-01 | 95.9% | 43.1% |
| 4aqsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 55.0 | 4.17e-01 | 96.9% | 91.3% |
| 1i5pA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 55.0 | 4.69e-01 | 95.9% | 85.4% |
| 5cadA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 48.0 | 3.81e-01 | 95.9% | 40.4% |
| 1lr5B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 50.0 | 4.27e-01 | 95.9% | 52.2% |
| 1nlqE00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.62 | 54.0 | 5.44e-01 | 94.8% | 96.9% |
| 4dmiA02 | 2.60.120.1010 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 53.0 | 4.77e-01 | 94.8% | 75.9% |
| 1flkA00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.62 | 51.0 | 4.03e-01 | 89.7% | 67.3% |
| 1w2tA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.62 | 55.0 | 4.93e-01 | 97.9% | 94.8% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 55.0 | 5.17e-01 | 99.0% | 94.0% |
| 4yarA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 45.0 | 4.19e-01 | 96.9% | 61.8% |
| 4geiA00 | 2.60.40.640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 48.0 | 4.27e-01 | 86.6% | 91.7% |
| 6ovbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 52.0 | 4.50e-01 | 95.9% | 85.7% |
| 3eo6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 42.0 | 4.15e-01 | 92.8% | 66.0% |
| 2ii7H00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.61 | 50.0 | 4.92e-01 | 90.7% | 88.7% |
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 45.0 | 4.35e-01 | 93.8% | 70.6% |
| 2bgoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 51.0 | 4.90e-01 | 95.9% | 94.0% |
| 4i2oA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 46.0 | 4.31e-01 | 91.8% | 66.9% |
| 3t30C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.60 | 52.0 | 5.25e-01 | 95.9% | 96.8% |
| 7q61A01 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 48.0 | 4.60e-01 | 85.6% | 90.8% |
| 4lejA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 48.0 | 3.99e-01 | 95.9% | 49.7% |
| 1uijB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 46.0 | 3.87e-01 | 93.8% | 49.1% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 52.0 | 4.75e-01 | 97.9% | 98.4% |
| 5jpnB04 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.75e-01 | 95.9% | 83.5% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 46.0 | 4.32e-01 | 93.8% | 70.6% |
| 5tpvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 44.0 | 3.97e-01 | 94.8% | 58.0% |
| 3bgaA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.50e-01 | 86.6% | 93.3% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 45.0 | 4.27e-01 | 93.8% | 69.2% |
| 4mzuF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 45.0 | 3.97e-01 | 94.8% | 56.1% |
| 7pzaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 46.0 | 4.29e-01 | 93.8% | 68.9% |
| 5fljA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 43.0 | 3.55e-01 | 94.8% | 43.4% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 46.0 | 4.16e-01 | 93.8% | 65.9% |
| 3fmgA02 | 2.60.120.800 | Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2 | 0.56 | 45.0 | 4.74e-01 | 92.8% | 100.0% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 45.0 | 4.09e-01 | 93.8% | 65.9% |
| 1gqgC02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 3.46e-01 | 94.8% | 42.9% |
| 1ex0A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.42e-01 | 86.6% | 92.6% |
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.55 | 47.0 | 3.64e-01 | 95.9% | 42.3% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 3.90e-01 | 96.9% | 56.9% |
| 4cswA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.54 | 47.0 | 3.67e-01 | 96.9% | 89.6% |
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.54 | 27.0 | 3.43e-01 | 95.9% | 84.9% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.54 | 45.0 | 3.66e-01 | 94.8% | 50.3% |
| 2enqA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 47.0 | 4.02e-01 | 96.9% | 94.3% |
| 5buvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 3.83e-01 | 96.9% | 53.8% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.02e-01 | 82.5% | 89.4% |
| 1x5fA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.64e-01 | 79.4% | 68.3% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.11e-01 | 85.6% | 90.0% |
| 4h32A02 | 3.90.209.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain | 0.51 | 43.0 | 3.42e-01 | 95.9% | 60.9% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.28e-01 | 97.9% | 66.3% |
| 7sqxA02 | 3.30.70.2150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.11e-01 | 86.6% | 100.0% |
| 2e3vA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.79e-01 | 80.4% | 83.5% |
| 4o9gA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 3.99e-01 | 97.9% | 79.7% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4667107 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.83 | 78.0 | 6.69e-01 | 100.0% | 92.4% |
| 4235023 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.83 | 77.0 | 6.41e-01 | 97.9% | 90.3% |
| 4960572 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.78 | 70.0 | 5.79e-01 | 96.9% | 89.1% |
| 4025708 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.75 | 66.0 | 5.49e-01 | 96.9% | 90.5% |
| 4305531 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.75 | 66.0 | 5.62e-01 | 96.9% | 91.6% |
| 2523954 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.74 | 68.0 | 5.74e-01 | 100.0% | 84.7% |
| 5014955 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.74 | 63.0 | 5.90e-01 | 92.8% | 85.8% |
| 3941823 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.73 | 65.0 | 5.59e-01 | 96.9% | 93.3% |
| 4569092 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.73 | 64.0 | 5.44e-01 | 96.9% | 89.4% |
| 3236664 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.73 | 67.0 | 5.25e-01 | 100.0% | 87.7% |
| 3894462 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.73 | 64.0 | 5.41e-01 | 96.9% | 95.0% |
| 4304353 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.72 | 64.0 | 5.45e-01 | 96.9% | 91.6% |
| 2409668 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.72 | 63.0 | 5.30e-01 | 95.9% | 88.3% |
| 3571546 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.72 | 64.0 | 5.35e-01 | 96.9% | 95.0% |
| 5030450 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.71 | 62.0 | 5.44e-01 | 95.9% | 80.7% |
| 399921 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 63.0 | 5.44e-01 | 95.9% | 94.5% |
| 3626906 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.71 | 62.0 | 5.21e-01 | 94.8% | 93.1% |
| 3987226 | 10.32.1.87 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9_1 | 0.71 | 61.0 | 5.11e-01 | 95.9% | 88.8% |
| 3923740 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.70 | 62.0 | 5.24e-01 | 96.9% | 93.8% |
| 3586331 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.70 | 61.0 | 4.56e-01 | 96.9% | 81.2% |
| 4937335 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.70 | 63.0 | 5.26e-01 | 100.0% | 94.1% |
| 3795887 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.70 | 61.0 | 4.48e-01 | 96.9% | 78.1% |
| 4374005 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 47.0 | 4.49e-01 | 72.2% | 78.3% |
| 3243464 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 60.0 | 5.29e-01 | 96.9% | 91.4% |
| 4477578 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.67 | 58.0 | 5.06e-01 | 95.9% | 90.0% |
| 3924473 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 58.0 | 4.65e-01 | 96.9% | 81.1% |
| 3836543 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.66 | 48.0 | 3.99e-01 | 76.3% | 80.0% |
| 3508786 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 58.0 | 5.28e-01 | 94.8% | 91.2% |
| 4585641 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.66 | 57.0 | 5.01e-01 | 95.9% | 91.0% |
| 4382844 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 57.0 | 5.18e-01 | 96.9% | 86.2% |
| 4608515 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 58.0 | 5.08e-01 | 99.0% | 79.3% |
| 3510514 | 10.32.1.172 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like | 0.65 | 56.0 | 4.72e-01 | 96.9% | 98.2% |
| 3378054 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 57.0 | 4.64e-01 | 99.0% | 71.4% |
| 3282039 | 10.2.1.96 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PF28588 | 0.64 | 56.0 | 4.66e-01 | 96.9% | 87.1% |
| 3477335 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.64 | 56.0 | 5.27e-01 | 94.8% | 96.5% |
| 3491503 | 10.32.1.234 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PGAP1_3rd | 0.64 | 55.0 | 4.78e-01 | 95.9% | 80.7% |
| 5046039 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.64 | 54.0 | 5.11e-01 | 93.8% | 89.6% |
| 157233 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.64 | 55.0 | 4.56e-01 | 95.9% | 91.2% |
| 3514837 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 53.0 | 5.09e-01 | 93.8% | 88.7% |
| 3270012 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.63 | 55.0 | 4.88e-01 | 96.9% | 94.4% |
| 3677238 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 51.0 | 4.71e-01 | 89.7% | 82.3% |
| 3666722 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.62 | 51.0 | 4.50e-01 | 89.7% | 80.0% |
| 3318466 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.62 | 55.0 | 4.51e-01 | 100.0% | 68.6% |
| 1156534 | 10.5.1.4 ↗ | beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain › Hema_HEFG | 0.62 | 54.0 | 4.72e-01 | 96.9% | 93.3% |
| 5010181 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 4.03e-01 | 74.2% | 86.9% |
| 3220749 | 10.32.1.227 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glycoprotein | 0.62 | 55.0 | 5.34e-01 | 95.9% | 90.5% |
| 5009955 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 53.0 | 5.16e-01 | 95.9% | 88.2% |
| 3241013 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 53.0 | 5.18e-01 | 94.8% | 85.2% |
| 3821106 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 53.0 | 4.46e-01 | 96.9% | 67.6% |
| 3245210 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.62 | 54.0 | 4.90e-01 | 96.9% | 85.4% |
| 3997705 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 51.0 | 5.06e-01 | 96.9% | 84.8% |
| 4164556 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.61 | 53.0 | 5.26e-01 | 95.9% | 91.0% |
| 3596678 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 51.0 | 4.98e-01 | 93.8% | 95.5% |
| 3861637 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 53.0 | 4.69e-01 | 96.9% | 83.6% |
| 3999331 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.60 | 48.0 | 4.47e-01 | 87.6% | 100.0% |
| 4000498 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 4.31e-01 | 88.7% | 89.0% |
| 3400156 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.60 | 47.0 | 4.68e-01 | 94.8% | 81.0% |
| 3580968 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.60 | 51.0 | 4.38e-01 | 96.9% | 95.8% |
| 3230488 | 10.4.1.19 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein | 0.60 | 53.0 | 5.15e-01 | 95.9% | 92.4% |
| 4105812 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.60 | 51.0 | 4.56e-01 | 94.8% | 90.6% |
| 3622545 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.60 | 52.0 | 4.46e-01 | 99.0% | 83.1% |
| 3394622 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 50.0 | 4.87e-01 | 93.8% | 97.3% |
| 2149183 | 10.12.1.50 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_26 | 0.59 | 45.0 | 3.50e-01 | 93.8% | 36.7% |
| 316721 | 10.7.1.1 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 › ASRT | 0.59 | 48.0 | 4.69e-01 | 90.7% | 90.0% |
| 4971125 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 45.0 | 4.35e-01 | 81.4% | 94.5% |
| 4949566 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 4.58e-01 | 86.6% | 91.3% |
| 4144851 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.58 | 45.0 | 3.63e-01 | 93.8% | 41.0% |
| 4031118 | 10.12.1.100 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Polysacc_synt_C | 0.58 | 46.0 | 4.32e-01 | 93.8% | 70.6% |
| 4577896 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 46.0 | 4.46e-01 | 93.8% | 77.8% |
| 3433980 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.57 | 45.0 | 4.21e-01 | 85.6% | 100.0% |
| 3886020 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.57 | 46.0 | 3.62e-01 | 90.7% | 96.4% |
| 3309702 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.57 | 48.0 | 3.06e-01 | 95.9% | 22.0% |
| 3498618 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 46.0 | 3.75e-01 | 89.7% | 93.7% |
| 4000177 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.56 | 45.0 | 4.70e-01 | 89.7% | 94.4% |
| 3378441 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.56 | 43.0 | 4.07e-01 | 82.5% | 100.0% |
| 3882078 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 45.0 | 4.09e-01 | 89.7% | 88.9% |
| 5051828 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.55 | 44.0 | 4.28e-01 | 85.6% | 95.5% |
| 3954494 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.55 | 48.0 | 3.89e-01 | 96.9% | 51.6% |
| 3439356 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 44.0 | 4.04e-01 | 89.7% | 84.4% |
| 3617619 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 46.0 | 4.14e-01 | 91.8% | 68.1% |
| 4000176 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.55 | 45.0 | 4.41e-01 | 89.7% | 90.5% |
| 3273608 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 3.12e-01 | 87.6% | 35.9% |
| 3300479 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 42.0 | 4.03e-01 | 84.5% | 100.0% |
| 3888094 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 40.0 | 3.98e-01 | 78.4% | 83.0% |
| 5016530 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 4.32e-01 | 87.6% | 93.0% |
| 3250421 | 11.1.1.798 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TPPC8_1st | 0.53 | 46.0 | 4.09e-01 | 96.9% | 78.6% |
| 3217206 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.53 | 45.0 | 4.39e-01 | 95.9% | 93.6% |
| 3227297 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.53 | 43.0 | 3.98e-01 | 90.7% | 87.7% |
| 3606960 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.69e-01 | 89.7% | 95.5% |
| 4935664 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 46.0 | 4.29e-01 | 97.9% | 93.3% |
| 3923857 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.90e-01 | 84.5% | 85.7% |
| 3238729 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.69e-01 | 85.6% | 90.8% |
| 3525971 | 11.1.1.237 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 | 0.50 | 40.0 | 3.85e-01 | 86.6% | 88.2% |
| 3854546 | 11.1.1.694 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Uroplakin_II | 0.50 | 39.0 | 3.66e-01 | 85.6% | 84.0% |
D2
medium
residues 35-71_150-164
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iwcB00 | 3.30.360.110 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase domain | 0.56 | 41.0 | 3.97e-01 | 82.7% | 91.8% |
| 3t91B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 38.0 | 2.59e-01 | 78.8% | 58.0% |
| 1q8iA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 36.0 | 2.59e-01 | 76.9% | 96.8% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.40e-01 | 86.5% | 71.8% |
| 4hstA01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.51 | 34.0 | 2.52e-01 | 71.2% | 79.5% |
| 3f3fD01 | 2.20.25.500 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 33.0 | 3.36e-01 | 82.7% | 66.7% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 2.74e-01 | 84.6% | 65.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4535331 | 1.1.3.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › PrlF_antitoxin | 0.53 | 35.0 | 3.23e-01 | 71.2% | 65.3% |
| 4013718 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 40.0 | 3.01e-01 | 100.0% | 97.1% |
| 3211784 | 2.1.1.249 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_2nd | 0.51 | 39.0 | 3.52e-01 | 84.6% | 70.7% |
| 3470535 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.50 | 41.0 | 2.59e-01 | 100.0% | 27.5% |