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cap_protein
Euk-VirBat_adeno-associated_virus_YNM
cap_protein__YP_003858572__Bat_adeno-associated_virus_YNM__727962
Identity
- Accession:
- YP_003858572 ↗
- Protein ID:
- cap_protein
- Kingdom:
- euk
Quality
73.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Bat_adeno-associated_virus_YNM
TaxID: 727962
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 220-418_597-677
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 258.9 | 1.20e-76 | 71.4% | 40.9% |
| PF00740.24 | VP1_2 | 91.8 | 5.50e-26 | 29.6% | 13.5% |
D2
high
residues 421-559
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 51.1 | 1.20e-13 | 97.8% | 24.8% |
D3
medium
residues 17-131
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 98.9 | 2.20e-28 | 69.6% | 100.0% |