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capsid
Euk-VirRabbit_astrovirus_TN_2208_2010
capsid__YP_009094054__Rabbit_astrovirus_TN_2208_2010__1161132
Identity
- Accession:
- YP_009094054 ↗
- Protein ID:
- capsid
- Kingdom:
- euk
Quality
54.6
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Stellavirales›
Astroviridae›
Mamastrovirus›
Rabbit_astrovirus_TN/2208/2010
TaxID: 1161132
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 73-254
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03115.21 best | Astro_capsid_N | 222.9 | 6.00e-66 | 97.8% | 72.7% |
| PF03014.21 | SP2 | 27.3 | 3.90e-06 | 96.7% | 82.9% |
D2
high
residues 261-397
Domain cluster:
rep: capsid_protein__NP_056788__Hepeviridae__291484__D322-442
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20751.3 best | SP2_M | 26.7 | 7.30e-06 | 94.9% | 70.9% |