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capsid_portal_protein
Euk-VirEquid_gammaherpesvirus_2
capsid_portal_protein__NP_042640__Equid_gammaherpesvirus_2__12657
Identity
- Accession:
- NP_042640 ↗
- Protein ID:
- capsid_portal_protein
- Kingdom:
- euk
Quality
75.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Equid_gammaherpesvirus_2
TaxID: 12657
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-31_127-147_196-240_514-533
Domain cluster:
rep: putative_viron_protein__NP_050255__Human_betaherpesvirus_6B__32604__D63-87_177-199_238-289
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 29.9 | 2.90e-07 | 53.0% | 9.0% |
D2
medium
residues 32-126_534-568
Domain cluster:
rep: UL6__YP_010087410__Vombatid_gammaherpesvirus_1__2052651__D59-122_524-553
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 102.1 | 4.00e-29 | 73.9% | 17.5% |
D3
medium
residues 241-271_468-513
Domain cluster:
rep: capsid_portal_protein__YP_053100__Equid_alphaherpesvirus_1__10326__D312-348_556-585
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 65.5 | 4.60e-18 | 59.7% | 8.0% |
| PF01763.23 | Herpes_UL6 | 48.8 | 5.40e-13 | 42.9% | 5.9% |