capsid_portal_protein

Euk-Vir

Gallid_alphaherpesvirus_3

capsid_portal_protein__NP_066836__Gallid_alphaherpesvirus_3__35250

Identity

70.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Gallid_alphaherpesvirus_3

TaxID: 35250

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-100_159-306_550-612

PDB

Domain cluster: rep: U76__NP_042969__Human_betaherpesvirus_6A__32603__D57-282_547-593

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01763.23 best	Herpes_UL6	127.6	7.40e-37	57.7%	26.0%
PF01763.23	Herpes_UL6	85.2	5.10e-24	25.1%	11.7%
PF01763.23	Herpes_UL6	47.1	1.80e-12	18.0%	8.2%

D2 medium residues 101-158

PDB

Domain cluster: rep: capsid_portal_protein__YP_009054959__Equid_alphaherpesvirus_3__80341__D106-178

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01763.23 best	Herpes_UL6	42.3	5.10e-11	100.0%	9.3%

D3 medium residues 312-354_522-549

PDB

D4 medium residues 436-494

PDB

Domain cluster: rep: capsid_portal_protein__YP_009342400__Spheniscid_alphaherpesvirus_1__2560777__D434-489

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01763.23 best	Herpes_UL6	49.4	3.60e-13	100.0%	9.7%