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capsid_portal_protein
Euk-VirMeleagrid_alphaherpesvirus_1
capsid_portal_protein__NP_073299__Meleagrid_alphaherpesvirus_1__37108
Identity
- Accession:
- NP_073299 ↗
- Protein ID:
- capsid_portal_protein
- Kingdom:
- euk
Quality
70.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Meleagrid_alphaherpesvirus_1
TaxID: 37108
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-218_230-315_550-637
Domain cluster:
rep: U76__NP_042969__Human_betaherpesvirus_6A__32603__D57-282_547-593
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 244.5 | 2.70e-72 | 72.5% | 43.5% |
| PF01763.23 | Herpes_UL6 | 109.4 | 2.30e-31 | 26.9% | 15.9% |
D2
medium
residues 448-509
Domain cluster:
rep: capsid_portal_protein__YP_009342400__Spheniscid_alphaherpesvirus_1__2560777__D434-489
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 49.2 | 4.20e-13 | 100.0% | 11.2% |