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capsid_portal_protein
Euk-VirHuman_alphaherpesvirus_1
capsid_portal_protein__YP_009137080__Human_alphaherpesvirus_1__10298
Identity
- Accession:
- YP_009137080 ↗
- Protein ID:
- capsid_portal_protein
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Human_alphaherpesvirus_1
TaxID: 10298
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-82_153-274_523-589
Domain cluster:
rep: U76__NP_042969__Human_betaherpesvirus_6A__32603__D57-282_547-593
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 102.4 | 3.30e-29 | 50.6% | 22.5% |
| PF01763.23 | Herpes_UL6 | 78.0 | 7.80e-22 | 27.9% | 12.2% |
| PF01763.23 | Herpes_UL6 | 49.6 | 3.20e-13 | 18.7% | 8.0% |
D2
medium
residues 83-152
Domain cluster:
rep: capsid_portal_protein__YP_009054959__Equid_alphaherpesvirus_3__80341__D106-178
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 42.4 | 4.70e-11 | 98.6% | 10.6% |