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capsid_portal_protein
Euk-VirSpheniscid_alphaherpesvirus_1
capsid_portal_protein__YP_009342400__Spheniscid_alphaherpesvirus_1__2560777
Identity
- Accession:
- YP_009342400 ↗
- Protein ID:
- capsid_portal_protein
- Kingdom:
- euk
Quality
67.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Spheniscid_alphaherpesvirus_1
TaxID: 2560777
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-311_594-658
Domain cluster:
rep: U76__NP_042969__Human_betaherpesvirus_6A__32603__D57-282_547-593
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 259.8 | 6.40e-77 | 78.0% | 43.0% |
| PF01763.23 | Herpes_UL6 | 67.4 | 1.30e-18 | 19.4% | 11.3% |
D2
medium
residues 434-489
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 56.8 | 2.10e-15 | 100.0% | 9.7% |