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capsid_portal_protein
Euk-VirRhinolophus_gammaherpesvirus_1
capsid_portal_protein__YP_009551852__Rhinolophus_gammaherpesvirus_1__2054179
Identity
- Accession:
- YP_009551852 ↗
- Protein ID:
- capsid_portal_protein
- Kingdom:
- euk
Quality
77.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Rhinolophus_gammaherpesvirus_1
TaxID: 2054179
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 50-122_526-566
Domain cluster:
rep: UL6__YP_010087410__Vombatid_gammaherpesvirus_1__2052651__D59-122_524-553
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 71.2 | 8.70e-20 | 66.7% | 13.5% |
D2
medium
residues 245-275_456-496
Domain cluster:
rep: capsid_portal_protein__YP_053100__Equid_alphaherpesvirus_1__10326__D312-348_556-585
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 58.7 | 5.70e-16 | 59.7% | 7.7% |
| PF01763.23 | Herpes_UL6 | 42.9 | 3.40e-11 | 43.1% | 5.7% |