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capsid_portal_protein
Euk-VirCervid_alphaherpesvirus_3
capsid_portal_protein__YP_010087596__Cervid_alphaherpesvirus_3__2115790
Identity
- Accession:
- YP_010087596 ↗
- Protein ID:
- capsid_portal_protein
- Kingdom:
- euk
Quality
69.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Cervid_alphaherpesvirus_3
TaxID: 2115790
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-85_153-290_522-607
Domain cluster:
rep: U76__NP_042969__Human_betaherpesvirus_6A__32603__D57-282_547-593
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 111.9 | 4.10e-32 | 45.0% | 23.8% |
| PF01763.23 | Herpes_UL6 | 118.4 | 4.50e-34 | 28.5% | 15.5% |
| PF01763.23 | Herpes_UL6 | 43.7 | 2.00e-11 | 15.2% | 7.9% |
D2
medium
residues 86-152_608-629
Domain cluster:
rep: capsid_portal_protein__YP_009054959__Equid_alphaherpesvirus_3__80341__D106-178
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 48.0 | 9.50e-13 | 85.4% | 11.0% |