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capsid_portal_protein
Euk-VirPapiine_alphaherpesvirus_2
capsid_portal_protein__YP_443852__Papiine_alphaherpesvirus_2__340907
Identity
- Accession:
- YP_443852 ↗
- Protein ID:
- capsid_portal_protein
- Kingdom:
- euk
Quality
73.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Papiine_alphaherpesvirus_2
TaxID: 340907
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 71-270_573-619
Domain cluster:
rep: capsid_portal_protein__NP_040176__Human_alphaherpesvirus_3__10335__D97-193_213-262_618-655
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 153.0 | 1.50e-44 | 82.2% | 34.7% |
D2
medium
residues 271-308_514-538_550-572
Domain cluster:
rep: capsid_portal_protein__YP_053100__Equid_alphaherpesvirus_1__10326__D312-348_556-585
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 34.5 | 1.20e-08 | 57.0% | 10.2% |
| PF01763.23 | Herpes_UL6 | 44.2 | 1.30e-11 | 50.0% | 7.1% |