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capsid_protein_1

Euk-Vir

Mink_bocavirus_1

capsid_protein_1__YP_009272915__Mink_bocavirus_1__2259808

Identity

Accession:
YP_009272915 ↗
Protein ID:
capsid_protein_1
Kingdom:
euk

Quality

69.2 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Bocaparvovirus› Mink_bocavirus_1

TaxID: 2259808

Cluster

View cluster (92 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-95
PDB
Domain cluster: rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08398.16 best Phospholip_A2_4 96.5 1.30e-27 90.9% 98.8%
D2 medium residues 184-202_233-290_371-390_591-691
PDB
Domain cluster: rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00740.24 best VP1_2 40.4 2.10e-10 43.9% 11.8%
D3 medium residues 203-232_291-370
PDB
Domain cluster: rep: capsid_protein_2__YP_009272916__Mink_bocavirus_1__2259808__D75-100_121-246
D4 medium residues 391-468_495-545
PDB