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capsid_protein_VP1

Euk-Vir

Human_bocavirus_4_NI

capsid_protein_VP1__YP_002916062__Human_bocavirus_4_NI__1511883

Identity

Accession:
YP_002916062 ↗
Protein ID:
capsid_protein_VP1
Kingdom:
euk

Quality

67.1 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Bocaparvovirus› Human_bocavirus_4_NI

TaxID: 1511883

Cluster

View cluster (92 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-97
PDB
Domain cluster: rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08398.16 best Phospholip_A2_4 105.7 1.70e-30 89.8% 98.8%
D2 medium residues 177-195_228-315_358-384_423-431_541-610
PDB
Domain cluster: rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00740.24 best VP1_2 60.1 2.30e-16 50.7% 17.0%
D3 medium residues 196-227_316-357
PDB
Domain cluster: rep: VP2__YP_010087790__Primate_bocaparvovirus_3__2654204__D72-103_156-226
D4 medium residues 611-670
PDB