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capsid_protein_VP
Euk-VirMuscovy_duck_parvovirus
capsid_protein_VP__YP_068411__Muscovy_duck_parvovirus__37325
Identity
- Accession:
- YP_068411 ↗
- Protein ID:
- capsid_protein_VP
- Kingdom:
- euk
Quality
70.1
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Muscovy_duck_parvovirus
TaxID: 37325
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-16_48-137
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 112.9 | 9.60e-33 | 75.5% | 100.0% |
D2
high
residues 227-423_606-685
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 241.9 | 1.70e-71 | 71.5% | 41.1% |
| PF00740.24 | VP1_2 | 73.4 | 2.10e-20 | 29.6% | 13.3% |
D3
medium
residues 426-478_502-565_591-605