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capsid_protein_VP
Euk-VirMuscovy_duck_parvovirus
capsid_protein_VP__YP_068413__Muscovy_duck_parvovirus__37325
Identity
- Accession:
- YP_068413 ↗
- Protein ID:
- capsid_protein_VP
- Kingdom:
- euk
Quality
75.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Muscovy_duck_parvovirus
TaxID: 37325
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-224_409-487
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 242.0 | 1.70e-71 | 71.6% | 41.1% |
| PF00740.24 | VP1_2 | 72.1 | 5.00e-20 | 29.4% | 13.1% |
D2
medium
residues 226-286
Domain cluster:
rep: capsid_protein__YP_077178__Adeno-associated_virus_-_7__202812__D428-485
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 30.2 | 2.50e-07 | 100.0% | 11.8% |