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capsid_protein
Euk-VirDuck_astrovirus_C-NGB
capsid_protein__YP_002728003__Duck_astrovirus_C-NGB__622438
Identity
- Accession:
- YP_002728003 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
56.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Stellavirales›
Astroviridae›
Avastrovirus›
Duck_astrovirus_C-NGB
TaxID: 622438
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 82-268
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03115.21 best | Astro_capsid_N | 222.9 | 6.10e-66 | 98.4% | 72.3% |
CATH (81)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.94 | 89.0 | 9.03e-01 | 100.0% | 98.4% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 74.0 | 7.37e-01 | 100.0% | 84.7% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 83.0 | 8.32e-01 | 100.0% | 96.3% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 75.0 | 7.97e-01 | 100.0% | 98.8% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 72.0 | 7.73e-01 | 100.0% | 97.5% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 72.0 | 7.58e-01 | 98.9% | 97.0% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 73.0 | 6.17e-01 | 100.0% | 58.4% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 73.0 | 7.51e-01 | 100.0% | 93.8% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 72.0 | 7.31e-01 | 100.0% | 90.2% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 73.0 | 7.05e-01 | 100.0% | 82.7% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 70.0 | 6.57e-01 | 100.0% | 74.8% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 77.0 | 7.82e-01 | 98.4% | 100.0% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 70.0 | 6.59e-01 | 100.0% | 77.0% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 72.0 | 6.45e-01 | 100.0% | 70.0% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 68.0 | 6.78e-01 | 98.4% | 85.5% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 70.0 | 6.44e-01 | 100.0% | 74.0% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 71.0 | 6.66e-01 | 100.0% | 79.5% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 70.0 | 6.26e-01 | 100.0% | 68.6% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 68.0 | 6.62e-01 | 100.0% | 83.2% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 74.0 | 6.52e-01 | 100.0% | 77.3% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 73.0 | 6.60e-01 | 100.0% | 76.8% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 69.0 | 6.52e-01 | 100.0% | 80.5% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 62.0 | 6.19e-01 | 100.0% | 82.0% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 73.0 | 6.28e-01 | 100.0% | 76.4% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 61.0 | 6.25e-01 | 100.0% | 84.7% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 72.0 | 6.18e-01 | 100.0% | 70.2% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 72.0 | 6.83e-01 | 100.0% | 86.3% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 73.0 | 6.82e-01 | 100.0% | 86.9% |
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 73.0 | 6.86e-01 | 100.0% | 85.4% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 70.0 | 6.61e-01 | 100.0% | 82.9% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 68.0 | 5.44e-01 | 100.0% | 50.4% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 69.0 | 6.95e-01 | 100.0% | 96.2% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 71.0 | 6.31e-01 | 100.0% | 75.4% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 69.0 | 6.44e-01 | 100.0% | 80.5% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 67.0 | 6.34e-01 | 100.0% | 79.7% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 64.0 | 5.19e-01 | 98.4% | 49.4% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 71.0 | 6.72e-01 | 100.0% | 86.7% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 66.0 | 5.98e-01 | 100.0% | 72.2% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 71.0 | 6.26e-01 | 100.0% | 82.4% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 6.22e-01 | 100.0% | 79.1% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 6.28e-01 | 100.0% | 79.8% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 6.20e-01 | 100.0% | 77.9% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 6.23e-01 | 100.0% | 78.9% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 69.0 | 5.89e-01 | 100.0% | 69.2% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 65.0 | 5.75e-01 | 100.0% | 69.2% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 58.0 | 6.15e-01 | 99.5% | 96.4% |
| 2vveA01 | 2.60.120.770 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 35.0 | 4.82e-01 | 96.3% | 93.5% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 56.0 | 5.99e-01 | 99.5% | 96.9% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 62.0 | 5.86e-01 | 100.0% | 83.3% |
| 5jzgA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 57.0 | 5.35e-01 | 100.0% | 74.8% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.67 | 49.0 | 5.55e-01 | 97.3% | 100.0% |
| 2ws9100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 62.0 | 5.63e-01 | 100.0% | 78.9% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 62.0 | 5.17e-01 | 100.0% | 77.2% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 62.0 | 5.39e-01 | 100.0% | 70.7% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 61.0 | 5.36e-01 | 100.0% | 80.7% |
| 1b35A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 61.0 | 5.40e-01 | 100.0% | 80.0% |
| 1cov100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 60.0 | 5.32e-01 | 100.0% | 73.6% |
| 3jciA00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.65 | 59.0 | 5.92e-01 | 99.5% | 95.8% |
| 1s58A00 | 2.170.30.10 | Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 | 0.65 | 60.0 | 4.30e-01 | 100.0% | 96.4% |
| 6f2sH01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 59.0 | 5.58e-01 | 97.3% | 85.6% |
| 6mnjA01 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 47.0 | 5.11e-01 | 92.5% | 94.2% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.61 | 34.0 | 4.10e-01 | 95.2% | 82.5% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 55.0 | 4.92e-01 | 100.0% | 70.1% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 42.0 | 4.85e-01 | 96.3% | 100.0% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 30.0 | 4.01e-01 | 94.1% | 92.7% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 41.0 | 4.73e-01 | 96.8% | 100.0% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 46.0 | 4.92e-01 | 95.2% | 96.9% |
| 4kq7A02 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.57 | 47.0 | 4.56e-01 | 99.5% | 78.2% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 40.0 | 4.60e-01 | 94.7% | 100.0% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 39.0 | 4.08e-01 | 86.1% | 78.4% |
| 6mvfA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 42.0 | 4.64e-01 | 94.7% | 98.6% |
| 2orzA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 42.0 | 4.50e-01 | 97.3% | 93.7% |
| 5y4mA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 41.0 | 4.54e-01 | 95.7% | 99.3% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 4.51e-01 | 96.8% | 89.8% |
| 2vovA00 | 2.60.120.1220 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 4.07e-01 | 94.1% | 85.9% |
| 1mpxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.27e-01 | 95.7% | 93.7% |
| 4pt6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 41.0 | 4.43e-01 | 95.2% | 99.4% |
| 1fx5B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 4.29e-01 | 97.3% | 99.2% |
| 1lnsA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 4.39e-01 | 96.3% | 90.3% |
| 3gldA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 30.0 | 3.42e-01 | 82.9% | 74.1% |
| 3w5mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 39.0 | 3.88e-01 | 87.2% | 76.6% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1877512 | 10.2.1.32 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N | 0.93 | 87.0 | 8.82e-01 | 99.5% | 97.8% |
| 2539045 | 10.2.1.12 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Luteo_coat | 0.90 | 66.0 | 7.53e-01 | 98.9% | 96.6% |
| 146646 | 10.2.1.30 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 | 0.89 | 82.0 | 8.16e-01 | 99.5% | 92.7% |
| 1693524 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.89 | 73.0 | 7.50e-01 | 100.0% | 87.8% |
| 1724852 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.88 | 75.0 | 7.95e-01 | 100.0% | 98.8% |
| 1758310 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.85 | 73.0 | 7.10e-01 | 100.0% | 81.9% |
| 2441244 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.85 | 79.0 | 7.40e-01 | 100.0% | 82.3% |
| 2542980 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.85 | 72.0 | 7.17e-01 | 98.9% | 85.9% |
| 1693522 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.84 | 72.0 | 7.29e-01 | 100.0% | 89.7% |
| 328688 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.83 | 73.0 | 7.05e-01 | 100.0% | 82.7% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 70.0 | 6.59e-01 | 100.0% | 77.0% |
| 140027 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 72.0 | 6.45e-01 | 100.0% | 70.0% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 71.0 | 6.20e-01 | 100.0% | 65.0% |
| 2389609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.80 | 75.0 | 6.85e-01 | 100.0% | 77.4% |
| 2793614 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.80 | 70.0 | 6.62e-01 | 100.0% | 79.4% |
| 1693517 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.79 | 68.0 | 6.62e-01 | 99.5% | 83.0% |
| 2505858 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.79 | 65.0 | 6.44e-01 | 97.3% | 81.2% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 75.0 | 6.72e-01 | 100.0% | 76.8% |
| 1696117 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.79 | 67.0 | 6.76e-01 | 100.0% | 89.7% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.79 | 69.0 | 6.68e-01 | 100.0% | 82.8% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.78 | 58.0 | 6.00e-01 | 98.4% | 80.6% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.78 | 68.0 | 6.66e-01 | 100.0% | 84.2% |
| 4888111 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.78 | 68.0 | 6.81e-01 | 100.0% | 89.9% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.78 | 58.0 | 5.89e-01 | 88.2% | 77.7% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 73.0 | 6.61e-01 | 100.0% | 76.8% |
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 69.0 | 6.51e-01 | 100.0% | 79.8% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 73.0 | 6.28e-01 | 100.0% | 76.4% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 72.0 | 6.18e-01 | 100.0% | 70.2% |
| 289259 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.76 | 73.0 | 6.78e-01 | 100.0% | 85.8% |
| 1444532 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.76 | 70.0 | 6.61e-01 | 100.0% | 82.9% |
| 2440135 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.76 | 72.0 | 6.69e-01 | 100.0% | 82.5% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.76 | 68.0 | 6.86e-01 | 100.0% | 94.1% |
| 2099184 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.76 | 71.0 | 6.00e-01 | 100.0% | 73.7% |
| 1215 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.76 | 64.0 | 6.66e-01 | 98.9% | 95.9% |
| 31171 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.76 | 60.0 | 6.09e-01 | 100.0% | 82.9% |
| 1949031 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 71.0 | 6.31e-01 | 100.0% | 75.4% |
| 2099173 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 72.0 | 6.25e-01 | 100.0% | 83.2% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 71.0 | 6.34e-01 | 100.0% | 75.2% |
| 1233 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.75 | 71.0 | 7.08e-01 | 100.0% | 96.8% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 67.0 | 6.34e-01 | 100.0% | 79.7% |
| 2982737 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.75 | 71.0 | 6.12e-01 | 100.0% | 74.8% |
| 1232 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.75 | 71.0 | 7.02e-01 | 100.0% | 98.5% |
| 143449 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.75 | 64.0 | 6.61e-01 | 98.4% | 95.5% |
| 1234 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.75 | 71.0 | 7.10e-01 | 100.0% | 98.4% |
| 2862065 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.75 | 60.0 | 6.23e-01 | 100.0% | 89.7% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 69.0 | 6.19e-01 | 100.0% | 74.1% |
| 3075118 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 70.0 | 6.17e-01 | 100.0% | 80.9% |
| 2330242 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.74 | 61.0 | 6.19e-01 | 95.7% | 88.5% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 67.0 | 6.22e-01 | 100.0% | 79.1% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 6.28e-01 | 100.0% | 79.8% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 5.95e-01 | 100.0% | 73.3% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.73 | 66.0 | 5.97e-01 | 100.0% | 73.9% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 6.22e-01 | 100.0% | 78.5% |
| 1489398 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 67.0 | 6.09e-01 | 100.0% | 76.9% |
| 1866052 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.72 | 58.0 | 5.65e-01 | 100.0% | 76.4% |
| 3478158 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.72 | 44.0 | 5.22e-01 | 93.6% | 89.6% |
| 1216 | 10.2.1.37 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C | 0.71 | 58.0 | 6.15e-01 | 99.5% | 96.4% |
| 3586546 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 46.0 | 5.47e-01 | 95.7% | 93.8% |
| 143450 | 10.2.1.37 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C | 0.70 | 56.0 | 5.99e-01 | 99.5% | 96.9% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.68 | 64.0 | 5.72e-01 | 100.0% | 74.3% |
| 2579092 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.68 | 63.0 | 5.56e-01 | 100.0% | 81.3% |
| 1204 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.68 | 62.0 | 5.34e-01 | 100.0% | 64.6% |
| 1713715 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.68 | 62.0 | 5.37e-01 | 100.0% | 64.9% |
| 152483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.67 | 62.0 | 5.41e-01 | 100.0% | 69.6% |
| 3022795 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.67 | 62.0 | 4.56e-01 | 99.5% | 69.8% |
| 2099165 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.66 | 62.0 | 4.94e-01 | 100.0% | 67.6% |
| 2884840 | 10.2.1.50 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 60.0 | 5.14e-01 | 100.0% | 63.1% |
| 2710690 | 10.2.1.29 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid | 0.65 | 60.0 | 5.84e-01 | 99.5% | 91.5% |
| 148379 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.65 | 60.0 | 5.08e-01 | 100.0% | 62.6% |
| 1852013 | 11.1.5.40 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › BNR_assoc_N | 0.62 | 48.0 | 5.04e-01 | 94.7% | 88.7% |
| 3404051 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 48.0 | 5.22e-01 | 96.8% | 99.4% |
| 140026 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.61 | 55.0 | 4.92e-01 | 100.0% | 70.1% |
| 3181788 | 10.32.1.32 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Bac_rhamnosid_N | 0.57 | 39.0 | 3.78e-01 | 95.2% | 62.0% |
| 3593524 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 48.0 | 4.67e-01 | 95.7% | 98.5% |
| 3168473 | 10.32.1.306 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 | 0.53 | 47.0 | 4.75e-01 | 96.3% | 97.9% |
| 3569707 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.53 | 41.0 | 4.46e-01 | 96.8% | 95.6% |
| 4946469 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.52 | 46.0 | 4.53e-01 | 96.8% | 99.0% |
| 3869986 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.51 | 42.0 | 4.39e-01 | 98.9% | 94.3% |
| 3562433 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.51 | 42.0 | 4.41e-01 | 97.9% | 97.1% |
| 3057120 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.51 | 45.0 | 4.44e-01 | 95.7% | 98.0% |
| 5039694 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 42.0 | 4.44e-01 | 97.3% | 100.0% |
| 5021919 | 10.1.2.194 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like | 0.50 | 42.0 | 4.36e-01 | 94.1% | 97.1% |
| 3278369 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.50 | 45.0 | 4.15e-01 | 95.7% | 99.1% |
D2
high
residues 276-408
Domain cluster:
rep: capsid_protein__NP_056788__Hepeviridae__291484__D322-442
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ztnA02 | 2.40.30.190 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.79 | 68.0 | 6.73e-01 | 100.0% | 87.2% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 42.0 | 5.22e-01 | 99.2% | 100.0% |
| 3kw2A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.69 | 34.0 | 4.61e-01 | 78.2% | 92.6% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 43.0 | 5.23e-01 | 99.2% | 100.0% |
| 3u28C00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.62 | 39.0 | 4.44e-01 | 100.0% | 89.1% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 35.0 | 4.09e-01 | 97.0% | 79.6% |
| 3a35A01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.60 | 39.0 | 4.49e-01 | 100.0% | 93.5% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 34.0 | 4.00e-01 | 89.5% | 79.6% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 38.0 | 4.14e-01 | 91.0% | 78.0% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.59 | 28.0 | 3.71e-01 | 78.9% | 82.4% |
| 2nryD01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 29.0 | 3.39e-01 | 73.7% | 68.5% |
| 8eq1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.56 | 37.0 | 4.40e-01 | 98.5% | 100.0% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.56 | 42.0 | 4.61e-01 | 100.0% | 96.4% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 31.0 | 3.83e-01 | 74.4% | 85.9% |
| 1vf7F01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.56 | 41.0 | 4.55e-01 | 100.0% | 100.0% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.55 | 37.0 | 4.08e-01 | 97.0% | 84.4% |
| 3f7wA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 29.0 | 3.44e-01 | 72.9% | 73.6% |
| 1zarA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 31.0 | 3.84e-01 | 75.2% | 90.1% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.54 | 41.0 | 4.46e-01 | 100.0% | 96.3% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.54 | 34.0 | 3.74e-01 | 89.5% | 80.4% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.54 | 42.0 | 4.53e-01 | 100.0% | 96.5% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.53 | 37.0 | 3.82e-01 | 92.5% | 76.0% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 28.0 | 3.26e-01 | 75.2% | 74.2% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 29.0 | 3.43e-01 | 86.5% | 82.8% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 37.0 | 3.82e-01 | 89.5% | 82.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1877513 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 65.0 | 6.72e-01 | 89.5% | 93.6% |
| 4085589 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.68 | 40.0 | 4.96e-01 | 99.2% | 96.2% |
| 3967745 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 38.0 | 4.80e-01 | 99.2% | 96.0% |
| 3973637 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 42.0 | 4.65e-01 | 100.0% | 97.0% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.59 | 42.0 | 4.63e-01 | 100.0% | 93.3% |
| 3945834 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.58 | 42.0 | 4.69e-01 | 99.2% | 98.0% |
| 4382401 | 1.1.7.100 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N | 0.58 | 37.0 | 4.48e-01 | 97.7% | 100.0% |
| 5024800 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 48.0 | 5.08e-01 | 97.7% | 99.2% |
| 4105189 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 34.0 | 3.95e-01 | 91.0% | 83.2% |
| 3947980 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.55 | 34.0 | 3.88e-01 | 91.7% | 82.0% |
| 3603182 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.55 | 31.0 | 3.90e-01 | 88.0% | 92.5% |
| 1806542 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.55 | 41.0 | 3.94e-01 | 99.2% | 67.5% |
| 5003841 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 41.0 | 4.45e-01 | 97.7% | 95.5% |
| 3184173 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.54 | 32.0 | 3.03e-01 | 100.0% | 48.8% |
| 3371009 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.54 | 41.0 | 4.09e-01 | 100.0% | 79.3% |
| 4995896 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 42.0 | 4.28e-01 | 100.0% | 86.9% |
| 78 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.53 | 37.0 | 3.82e-01 | 92.5% | 76.0% |
| 4026004 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 40.0 | 4.30e-01 | 100.0% | 95.7% |
| 3925903 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.52 | 38.0 | 3.75e-01 | 75.9% | 78.6% |
| 3276050 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.50 | 40.0 | 3.38e-01 | 99.2% | 49.8% |