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capsid_protein
Euk-VirBocavirus_gorilla_GBoV1_2009
capsid_protein__YP_003799998__Bocavirus_gorilla_GBoV1_2009__864686
Identity
- Accession:
- YP_003799998 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
69.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Bocaparvovirus›
Bocavirus_gorilla/GBoV1/2009
TaxID: 864686
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-95
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 63.6 | 2.30e-17 | 88.9% | 68.8% |
D2
medium
residues 196-249_285-360_552-570
Domain cluster:
rep: capsid_protein_2__YP_009272916__Mink_bocavirus_1__2259808__D75-100_121-246
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 34.2 | 1.50e-08 | 27.5% | 5.7% |
D3
medium
residues 479-505_616-671