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capsid_protein

Euk-Vir

Bocavirus_gorilla_GBoV1_2009

capsid_protein__YP_003799999__Bocavirus_gorilla_GBoV1_2009__864686

Identity

Accession:
YP_003799999 ↗
Protein ID:
capsid_protein
Kingdom:
euk

Quality

77.6 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Bocaparvovirus› Bocavirus_gorilla/GBoV1/2009

TaxID: 864686

Cluster

View cluster (92 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-62_106-143_232-277_444-542
PDB
Domain cluster: rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00740.24 best VP1_2 27.1 2.30e-06 29.8% 7.2%
D2 medium residues 63-105_144-231
PDB
Domain cluster: rep: VP2__YP_010087790__Primate_bocaparvovirus_3__2654204__D72-103_156-226
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00740.24 best VP1_2 28.4 8.90e-07 67.9% 14.9%
D3 medium residues 278-303_343-443
PDB
Domain cluster: rep: VP2__YP_009046825__Porcine_bocavirus_1_pig_ZJD_China_2006__795694__D308-330_371-473