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capsid_protein
Euk-VirPenaeus_vannamei_nodavirus
capsid_protein__YP_004207809__Penaeus_vannamei_nodavirus__430911
Identity
- Accession:
- YP_004207809 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
65.5
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Magsaviricetes›
Nodamuvirales›
Nodaviridae›
Penaeus_vannamei_nodavirus
TaxID: 430911
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 66-247
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00729.25 best | Viral_coat | 28.4 | 2.00e-06 | 79.7% | 45.4% |
D2
medium
residues 259-338