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capsid_protein

Euk-Vir

Santeuil_nodavirus

capsid_protein__YP_004221743__Santeuil_nodavirus__977913

Identity

Accession:
YP_004221743 ↗
Protein ID:
capsid_protein
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Magsaviricetes› Nodamuvirales› Nodaviridae› Santeuil_nodavirus

TaxID: 977913

Cluster

View cluster (26 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-210
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF11729.15 best Capsid-VNN 57.0 2.40e-15 99.4% 44.4%
PF00729.25 Viral_coat 36.0 9.20e-09 98.8% 76.3%
D2 high residues 230-378
PDB