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capsid_protein
Euk-VirErinnyis_ello_granulovirus
capsid_protein__YP_009091902__Erinnyis_ello_granulovirus__307444
Identity
- Accession:
- YP_009091902 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
72.6
mean pLDDT
Taxonomy
TaxID: 307444
Cluster
View cluster (41 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-153
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05073.18 best | Baculo_p24 | 171.5 | 1.90e-50 | 98.7% | 96.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b7hA03 | 1.20.1370.60 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.51 | 34.0 | 3.77e-01 | 95.4% | 88.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3429545 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.53 | 33.0 | 3.64e-01 | 95.4% | 75.2% |
| 5053506 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.52 | 30.0 | 3.48e-01 | 86.3% | 80.0% |
| 4928130 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.52 | 22.0 | 2.78e-01 | 89.5% | 64.4% |
| 5014623 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.51 | 29.0 | 3.20e-01 | 90.2% | 68.3% |
| 4986489 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.51 | 34.0 | 3.99e-01 | 90.8% | 98.1% |
| 4258966 | 108.2.1.1 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP | 0.51 | 31.0 | 3.62e-01 | 87.6% | 84.5% |