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capsid_protein

Euk-Vir

Erinnyis_ello_granulovirus

capsid_protein__YP_009091965__Erinnyis_ello_granulovirus__307444

Identity

Accession:
YP_009091965 ↗
Protein ID:
capsid_protein
Kingdom:
euk

Quality

74.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Erinnyis_ello_granulovirus

TaxID: 307444

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-99
PDB
Domain cluster: rep: vp1054__YP_009112672__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D40-103
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05789.17 best Baculo_VP1054 30.8 3.20e-07 100.0% 16.7%
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6mfxA02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.76 63.0 4.62e-01 89.2% 67.5%
3l1aA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.74 66.0 4.57e-01 100.0% 47.7%
2p0lA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.74 66.0 4.36e-01 100.0% 49.2%
1xkpB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.73 63.0 5.12e-01 100.0% 51.2%
2c8mB00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.73 64.0 4.32e-01 100.0% 53.5%
1wqwA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.72 64.0 4.62e-01 100.0% 51.9%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 53.0 5.05e-01 83.1% 68.0%
4bxiA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.71 64.0 4.90e-01 100.0% 47.3%
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.70 62.0 4.47e-01 100.0% 53.2%
4anoA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.70 54.0 3.76e-01 100.0% 25.8%
2e5aA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.70 63.0 4.25e-01 100.0% 50.8%
3a7rA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.69 62.0 4.14e-01 100.0% 48.8%
2ddzE00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.69 60.0 4.34e-01 100.0% 54.7%
2bddA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.68 53.0 4.35e-01 87.7% 98.4%
4fppA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.68 60.0 4.74e-01 100.0% 56.9%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 52.0 4.99e-01 95.4% 73.0%
3cx5B02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 56.0 4.43e-01 92.3% 47.4%
3eoqB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 58.0 4.25e-01 98.5% 43.2%
5t8uB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.67 59.0 3.97e-01 100.0% 46.0%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 53.0 4.71e-01 86.2% 60.9%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.66 55.0 4.50e-01 100.0% 47.7%
1vqzA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.66 59.0 4.00e-01 100.0% 49.6%
5xuhA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.66 50.0 4.10e-01 83.1% 100.0%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.66 51.0 4.21e-01 86.2% 100.0%
1htwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 49.0 3.70e-01 80.0% 93.0%
1yxsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 57.0 5.15e-01 100.0% 79.3%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.65 51.0 4.41e-01 84.6% 66.0%
6n3oA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 57.0 5.15e-01 100.0% 75.6%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.65 55.0 4.16e-01 95.4% 87.9%
3a0rA03 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.64 57.0 4.42e-01 100.0% 48.6%
1bccB01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.64 56.0 3.97e-01 100.0% 37.6%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.64 47.0 4.39e-01 80.0% 72.3%
1i82A00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 56.0 4.05e-01 100.0% 49.2%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.64 45.0 3.60e-01 81.5% 38.1%
4wxaA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.64 50.0 4.63e-01 86.2% 66.7%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 54.0 4.16e-01 100.0% 67.7%
1g84A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 56.0 4.78e-01 100.0% 63.8%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 46.0 4.36e-01 83.1% 64.6%
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 54.0 4.81e-01 100.0% 67.0%
4l68A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 54.0 4.55e-01 100.0% 57.3%
1r89A03 3.30.70.590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain 0.63 53.0 4.23e-01 95.4% 50.7%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.62 54.0 4.01e-01 100.0% 40.6%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.62 54.0 3.81e-01 100.0% 38.2%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.62 50.0 4.18e-01 100.0% 48.8%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 44.0 4.35e-01 83.1% 72.1%
3uc4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 52.0 4.82e-01 96.9% 72.9%
4xeaA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.62 54.0 3.74e-01 100.0% 36.4%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 48.0 4.44e-01 84.6% 66.3%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 54.0 4.81e-01 100.0% 70.2%
3gr5A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 43.0 4.29e-01 80.0% 70.6%
4iofB01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 53.0 4.00e-01 100.0% 45.0%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 53.0 4.73e-01 100.0% 68.4%
8b6jb01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 53.0 3.80e-01 100.0% 38.5%
4frwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 51.0 4.49e-01 100.0% 62.5%
7y8uF01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 53.0 3.86e-01 100.0% 38.8%
4d9uA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 50.0 4.58e-01 96.9% 68.2%
3oq3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 54.0 4.66e-01 100.0% 65.0%
2hw6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 53.0 4.85e-01 100.0% 75.0%
3eoqA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 52.0 3.71e-01 100.0% 37.9%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.61 47.0 3.67e-01 86.2% 98.0%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 56.0 4.12e-01 100.0% 71.3%
3cx5B01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.60 53.0 3.74e-01 100.0% 36.5%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.33e-01 100.0% 58.2%
2h00B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 3.63e-01 96.9% 71.0%
1omsA00 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.60 50.0 4.28e-01 100.0% 96.5%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 48.0 4.07e-01 93.8% 53.4%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.59 51.0 3.86e-01 100.0% 84.1%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 49.0 4.56e-01 96.9% 72.9%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.59 47.0 4.68e-01 100.0% 85.3%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.58 51.0 4.48e-01 100.0% 72.0%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 3.89e-01 96.9% 46.8%
1j5uA01 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.58 41.0 3.46e-01 75.4% 100.0%
1fthA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.58 42.0 3.61e-01 81.5% 100.0%
7kjhC01 2.60.40.2860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 50.0 4.13e-01 100.0% 73.4%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 49.0 4.17e-01 100.0% 68.4%
6u6pA01 3.30.1070.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE 0.56 48.0 4.57e-01 96.9% 100.0%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 38.0 3.24e-01 100.0% 42.3%
5go5A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.56 48.0 3.74e-01 100.0% 46.7%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.56 49.0 4.11e-01 100.0% 79.8%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 46.0 3.21e-01 95.4% 64.9%
3ku7A00 3.30.1070.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE 0.55 44.0 4.54e-01 92.3% 100.0%
2c47A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 45.0 4.40e-01 100.0% 87.7%
3kp0A03 3.30.30.60 Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain 0.54 40.0 4.03e-01 81.5% 80.6%
3mfxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 46.0 3.86e-01 98.5% 92.1%
3nsjA02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 41.0 3.24e-01 87.7% 87.5%
7alkA01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 2.86e-01 81.5% 96.2%
7altB01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 36.0 2.90e-01 81.5% 58.9%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4589697 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.75 56.0 5.25e-01 83.1% 65.0%
4438356 304.162.1.0 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.75 55.0 5.27e-01 83.1% 68.0%
4682556 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.74 55.0 5.10e-01 83.1% 63.7%
5035279 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.74 55.0 5.04e-01 86.2% 61.2%
4948386 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.73 56.0 5.21e-01 89.2% 66.3%
4519027 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.73 59.0 5.38e-01 87.7% 71.8%
4134039 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.72 52.0 4.99e-01 81.5% 66.7%
3433964 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.72 54.0 5.74e-01 83.1% 94.5%
3329735 327.11.2.37 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st 0.71 53.0 5.21e-01 80.0% 75.7%
3987665 225.1.1.9 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_5 0.71 65.0 4.84e-01 100.0% 49.0%
4935008 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.71 55.0 5.16e-01 84.6% 70.0%
3320790 304.4.1.43 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Transferase 0.70 55.0 4.50e-01 84.6% 77.5%
4129360 304.162.1.0 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.70 52.0 4.96e-01 80.0% 68.0%
4991852 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.70 53.0 4.97e-01 87.7% 66.3%
3601534 309.1.1.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.70 62.0 4.36e-01 100.0% 46.8%
4983119 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.69 53.0 4.81e-01 84.6% 60.7%
3981185 241.1.1.25 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF27378 0.69 58.0 4.78e-01 100.0% 52.2%
3271101 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.69 53.0 4.96e-01 89.2% 67.5%
3873815 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 58.0 4.58e-01 100.0% 45.2%
3607101 309.1.1.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.69 60.0 4.17e-01 100.0% 42.1%
3940716 206.1.1.44 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 0.68 61.0 3.80e-01 100.0% 23.3%
5017844 304.39.1.0 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.68 54.0 4.42e-01 86.2% 65.8%
4933794 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.68 53.0 4.98e-01 84.6% 68.8%
3717242 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 62.0 4.68e-01 100.0% 57.3%
3846973 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.68 62.0 5.31e-01 100.0% 70.0%
4940988 304.39.1.0 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.68 54.0 4.52e-01 86.2% 72.7%
3508836 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 60.0 4.86e-01 100.0% 66.4%
5027876 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.68 51.0 4.84e-01 83.1% 70.0%
4954520 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.68 51.0 4.81e-01 84.6% 66.3%
3622374 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.68 61.0 5.03e-01 100.0% 57.4%
5045251 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.67 51.0 4.83e-01 83.1% 70.0%
3602384 304.39.1.1 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.67 54.0 4.38e-01 86.2% 65.0%
5056226 304.126.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.67 47.0 4.68e-01 83.1% 70.0%
3792375 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.67 62.0 5.02e-01 100.0% 57.4%
3199331 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.67 54.0 5.05e-01 93.8% 71.2%
5014200 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.67 60.0 4.41e-01 100.0% 43.5%
3961719 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.67 57.0 4.24e-01 92.3% 69.7%
3895930 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 56.0 4.98e-01 100.0% 64.2%
5035849 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.67 49.0 4.66e-01 83.1% 65.8%
3959611 304.42.1.0 ↗ a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC 0.66 52.0 4.05e-01 84.6% 57.1%
6634 241.1.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.66 55.0 4.50e-01 100.0% 47.7%
4949748 304.39.1.0 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.66 55.0 4.41e-01 90.8% 66.4%
4967547 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.66 50.0 4.71e-01 83.1% 67.5%
5042213 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.66 52.0 4.91e-01 90.8% 71.2%
3514307 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.66 59.0 4.53e-01 100.0% 47.6%
5044588 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 53.0 3.97e-01 87.7% 61.3%
3230801 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.65 59.0 5.18e-01 100.0% 69.5%
4048260 304.42.1.1 ↗ a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC 0.65 50.0 3.85e-01 84.6% 51.6%
3612359 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.65 57.0 4.75e-01 100.0% 61.4%
3938814 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.65 58.0 4.87e-01 100.0% 60.0%
3208169 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.64 48.0 5.15e-01 81.5% 96.4%
5000786 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.64 49.0 4.58e-01 83.1% 70.0%
3739684 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.63 56.0 4.72e-01 100.0% 67.3%
3241498 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.63 56.0 4.80e-01 100.0% 66.7%
4943788 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.63 48.0 4.60e-01 86.2% 71.2%
3568084 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.63 55.0 4.61e-01 100.0% 60.0%
3494734 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.63 55.0 4.56e-01 100.0% 61.0%
3655963 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 47.0 4.66e-01 83.1% 77.1%
3939457 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.63 55.0 4.72e-01 100.0% 66.7%
3478309 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.62 56.0 4.77e-01 100.0% 68.6%
3322670 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.62 48.0 5.10e-01 87.7% 100.0%
3779961 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 55.0 4.27e-01 100.0% 51.7%
3390945 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.62 55.0 4.71e-01 100.0% 62.9%
4569098 304.18.1.0 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS 0.62 48.0 4.80e-01 86.2% 83.8%
3470249 304.42.1.0 ↗ a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC 0.62 48.0 3.79e-01 86.2% 61.4%
3302520 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.62 51.0 3.94e-01 100.0% 39.4%
3667432 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 55.0 4.81e-01 100.0% 67.4%
3353024 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.61 52.0 3.47e-01 100.0% 22.9%
419749 304.28.1.2 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.61 48.0 4.31e-01 86.2% 60.9%
3628863 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.61 54.0 4.11e-01 100.0% 41.9%
3581379 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.61 54.0 4.77e-01 100.0% 68.4%
3972057 11.1.1.410 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.60 54.0 4.59e-01 100.0% 64.8%
3936812 873.1.1.5 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.60 53.0 3.81e-01 100.0% 34.6%
4988829 304.110.1.1 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.60 46.0 4.02e-01 87.7% 55.5%
3912840 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.60 53.0 4.55e-01 100.0% 61.0%
3985634 3313.1.1.1 ↗ a+b two layers › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › DUF406 0.60 52.0 4.58e-01 100.0% 67.0%
1211839 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.60 51.0 4.59e-01 100.0% 67.7%
3232521 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.59 50.0 4.40e-01 96.9% 68.0%
3373453 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.59 44.0 4.75e-01 87.7% 98.1%
3926738 11.2.1.52 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem 0.59 46.0 3.66e-01 84.6% 98.5%
1309075 206.1.1.74 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.59 51.0 4.09e-01 100.0% 80.7%
4485368 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.59 52.0 3.56e-01 100.0% 47.7%
3897495 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.15e-01 100.0% 51.5%
3175120 242.1.1.2 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.58 50.0 4.27e-01 100.0% 66.4%
3604610 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.58 51.0 5.19e-01 98.5% 98.5%
3517977 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.57 51.0 4.79e-01 100.0% 87.5%
3808522 387.1.5.7 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL 0.56 44.0 4.57e-01 86.2% 98.3%
4410723 242.1.1.2 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.56 47.0 4.10e-01 100.0% 64.8%
3526610 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.55 47.0 3.42e-01 100.0% 54.6%
4009049 872.4.1.1 ↗ a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › YdgH_BhsA-like 0.53 39.0 3.71e-01 83.1% 65.0%
5029881 310.3.1.26 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HVO_2525_N 0.53 44.0 3.55e-01 100.0% 44.8%
4024931 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.50 40.0 3.02e-01 86.2% 91.6%
D2 high residues 106-335
PDB
Domain cluster: rep: viral_capsid_associated_protein__YP_009118574__Condylorrhiza_vestigialis_MNPV__1592576__D118-160_199-378
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05789.17 best Baculo_VP1054 254.9 2.00e-75 100.0% 67.3%