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capsid_protein
Euk-VirLagomorph_bocaparvovirus_1
capsid_protein__YP_009215303__Lagomorph_bocaparvovirus_1__2169774
Identity
- Accession:
- YP_009215303 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
66.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Bocaparvovirus›
Bocaparvovirus_lagomorph1
TaxID: 2169774
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-92
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 90.1 | 1.30e-25 | 89.9% | 100.0% |
D2
medium
residues 215-277_294-408
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 78.5 | 5.70e-22 | 98.3% | 32.8% |
D3
medium
residues 448-458_516-561_584-626_712-724