capsid_protein

Euk-Vir

Arabidopsis_halleri_partitivirus_1

capsid_protein__YP_009273019__Arabidopsis_halleri_partitivirus_1__1849335

Identity

54.9 mean pLDDT

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Partitiviridae› Arabidopsis_halleri_partitivirus_1

TaxID: 1849335

View cluster (12 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 228-341

PDB

D2 medium residues 96-216_342-374_471-487

PDB

Domain cluster: rep: coat_protein__YP_009508045__Carrot_cryptic_virus__589918__D88-201_328-358

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2w96A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.53	30.0	3.65e-01	83.0%	85.0%
4bu0A02	3.40.50.10190	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain	0.52	24.0	3.34e-01	84.8%	89.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3486312	192.7.1.0 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm	0.54	32.0	3.74e-01	87.1%	82.4%

D3 medium residues 375-433_451-470

PDB