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capsid_protein

Euk-Vir

Beihai_mantis_shrimp_virus_6

capsid_protein__YP_009333379__Beihai_mantis_shrimp_virus_6__1922433

Identity

Accession:
YP_009333379 ↗
Protein ID:
capsid_protein
Kingdom:
euk

Quality

61.1 mean pLDDT

Taxonomy

Beihai_mantis_shrimp_virus_6

TaxID: 1922433

Cluster

View cluster (26 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-204
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00729.25 best Viral_coat 26.3 8.90e-06 92.9% 74.4%
CATH (91)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.95 85.0 8.54e-01 94.5% 90.8%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.94 81.0 8.60e-01 95.1% 98.8%
3zxaC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 77.0 7.63e-01 94.5% 85.2%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.89 77.0 8.17e-01 94.5% 99.4%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.89 83.0 8.20e-01 96.7% 98.9%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 79.0 7.99e-01 92.3% 100.0%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 78.0 7.91e-01 94.5% 94.4%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.86 75.0 7.78e-01 92.9% 97.0%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 78.0 7.43e-01 96.7% 83.7%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 79.0 7.28e-01 96.2% 87.8%
1c8nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 79.0 7.32e-01 96.2% 85.8%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 78.0 7.82e-01 95.6% 100.0%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 73.0 6.78e-01 94.5% 75.2%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 80.0 6.93e-01 99.5% 82.3%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 78.0 7.32e-01 96.2% 87.3%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 77.0 7.19e-01 96.2% 87.6%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 76.0 6.47e-01 95.6% 88.4%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 76.0 7.08e-01 95.1% 84.3%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 79.0 6.64e-01 100.0% 89.9%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 76.0 6.72e-01 96.2% 71.3%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 77.0 6.83e-01 98.4% 80.1%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 74.0 6.77e-01 95.1% 74.9%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 76.0 7.08e-01 97.3% 82.3%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 72.0 6.91e-01 94.5% 83.2%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 73.0 6.84e-01 95.1% 80.9%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 74.0 6.26e-01 95.6% 70.9%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 74.0 7.45e-01 96.2% 98.4%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 6.65e-01 98.4% 73.7%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 72.0 7.06e-01 92.9% 87.6%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 73.0 6.38e-01 95.1% 76.2%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 72.0 7.01e-01 93.4% 89.2%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 6.48e-01 96.7% 84.3%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 73.0 6.16e-01 96.2% 70.6%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 73.0 6.82e-01 95.6% 93.1%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 72.0 6.68e-01 95.1% 80.6%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 73.0 6.70e-01 96.2% 81.9%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 72.0 6.45e-01 95.6% 79.8%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 71.0 6.41e-01 94.5% 80.3%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 64.0 6.50e-01 95.1% 85.8%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 71.0 6.42e-01 95.6% 79.1%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 64.0 6.39e-01 95.1% 83.6%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 65.0 5.17e-01 89.6% 46.8%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 70.0 6.42e-01 95.6% 80.0%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.77 55.0 6.07e-01 92.3% 89.9%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 69.0 6.23e-01 95.1% 73.0%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 69.0 6.05e-01 96.7% 92.3%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 69.0 6.48e-01 97.8% 87.8%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 67.0 5.60e-01 94.5% 91.9%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 66.0 6.48e-01 92.3% 100.0%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 67.0 5.99e-01 95.1% 79.7%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.74 57.0 5.63e-01 91.3% 76.3%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 66.0 5.81e-01 95.1% 80.4%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 67.0 5.84e-01 97.8% 74.4%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 66.0 5.68e-01 95.1% 81.4%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 65.0 5.36e-01 94.0% 77.2%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 67.0 5.82e-01 97.8% 71.6%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.73 63.0 6.57e-01 91.8% 99.4%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.73 65.0 6.41e-01 94.0% 96.3%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.72 49.0 5.44e-01 91.8% 86.1%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 36.0 4.79e-01 90.2% 86.3%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 34.0 4.60e-01 98.9% 83.0%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 65.0 5.34e-01 94.5% 76.4%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 66.0 5.74e-01 97.8% 73.6%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.71 45.0 5.47e-01 98.4% 97.4%
5jzgA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 5.99e-01 97.8% 79.2%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.68 42.0 5.14e-01 87.4% 95.7%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 5.30e-01 95.6% 70.8%
2qfeA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.67 46.0 5.27e-01 98.4% 92.1%
4indA02 2.60.120.1310 Mainly Beta › Sandwich › Jelly Rolls › 0.67 41.0 5.08e-01 88.5% 98.2%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 58.0 5.79e-01 91.8% 91.5%
1hx6A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 46.0 5.21e-01 92.9% 91.5%
1p8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 45.0 5.22e-01 90.7% 97.7%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.64 46.0 5.32e-01 88.5% 100.0%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 5.03e-01 89.6% 91.4%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.59 42.0 4.67e-01 96.2% 89.3%
3emrA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.57 44.0 3.82e-01 96.2% 52.2%
4r4xA02 2.60.120.1570 Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain 0.57 48.0 4.77e-01 88.5% 97.9%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 43.0 4.81e-01 88.0% 100.0%
4xabA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.57 43.0 3.92e-01 97.3% 58.4%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 4.78e-01 89.1% 90.9%
3kmhA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 38.0 3.64e-01 98.4% 57.3%
2x8kA03 2.60.120.860 Mainly Beta › Sandwich › Jelly Rolls › 0.56 35.0 4.28e-01 88.0% 100.0%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 4.71e-01 88.5% 90.9%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.53 44.0 4.12e-01 87.4% 94.1%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 4.12e-01 90.7% 99.6%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 44.0 4.50e-01 90.2% 98.3%
1dcsA00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.52 40.0 3.47e-01 97.8% 52.3%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.51 44.0 4.40e-01 91.8% 88.4%
3ammA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 42.0 3.81e-01 88.5% 94.5%
3fcsA04 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.50 42.0 4.41e-01 99.5% 96.4%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 41.0 4.26e-01 89.1% 90.9%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1693522 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.95 85.0 8.55e-01 95.1% 90.8%
1693524 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.95 82.0 8.27e-01 95.1% 89.0%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.89 78.0 8.19e-01 95.1% 99.4%
146646 10.2.1.30 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 0.89 80.0 7.90e-01 93.4% 93.3%
2589532 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.88 82.0 7.99e-01 95.6% 95.9%
2441244 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.87 81.0 7.49e-01 95.6% 84.1%
1758310 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.87 77.0 7.39e-01 95.1% 82.4%
4882965 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 60.0 6.72e-01 89.1% 87.8%
2542980 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.86 75.0 7.41e-01 93.4% 86.4%
328688 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.85 78.0 7.43e-01 96.7% 83.7%
289259 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.85 79.0 7.24e-01 96.2% 86.7%
1409656 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.85 79.0 7.32e-01 96.2% 85.8%
1232 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.84 78.0 7.63e-01 96.2% 99.5%
1877512 10.2.1.32 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N 0.84 76.0 7.63e-01 94.0% 98.4%
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 80.0 7.04e-01 98.9% 80.0%
215519 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.84 80.0 6.66e-01 100.0% 83.7%
1234 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.84 78.0 7.64e-01 96.2% 99.5%
1233 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.83 77.0 7.68e-01 96.2% 97.9%
2389609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 77.0 6.94e-01 96.7% 79.1%
2505858 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.83 71.0 6.89e-01 91.3% 81.7%
140024 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 76.0 6.47e-01 95.6% 88.4%
1444532 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.83 76.0 7.08e-01 95.1% 84.3%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 72.0 7.26e-01 94.0% 90.2%
2099184 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 75.0 6.19e-01 95.1% 74.3%
2726763 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 75.0 6.34e-01 95.1% 77.1%
4814721 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 76.0 7.28e-01 97.3% 86.6%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 77.0 6.84e-01 98.4% 80.1%
140027 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 76.0 6.72e-01 96.2% 71.3%
1841617 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 78.0 6.89e-01 100.0% 81.7%
1949032 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 74.0 6.77e-01 95.1% 74.9%
1693517 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.81 71.0 6.91e-01 93.4% 83.0%
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 74.0 6.26e-01 95.6% 70.9%
2440135 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.81 74.0 6.75e-01 95.1% 83.4%
1866058 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.80 74.0 7.45e-01 96.2% 98.4%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 76.0 6.65e-01 98.4% 73.7%
1949031 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 73.0 6.38e-01 95.1% 76.2%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 74.0 6.84e-01 96.2% 81.2%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.80 73.0 7.20e-01 96.2% 91.0%
4872939 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.80 74.0 7.08e-01 96.7% 85.6%
2721878 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 74.0 6.52e-01 96.2% 78.8%
1264422 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 73.0 6.82e-01 95.1% 81.3%
4900996 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.79 63.0 6.37e-01 84.2% 81.5%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 73.0 6.56e-01 95.6% 79.7%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.79 73.0 6.87e-01 95.6% 82.2%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 73.0 6.82e-01 95.6% 93.1%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 72.0 6.68e-01 95.1% 80.6%
2100469 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 73.0 6.43e-01 96.7% 80.1%
2099173 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 73.0 6.28e-01 96.2% 84.3%
2579094 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.79 72.0 6.26e-01 95.1% 75.9%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.79 72.0 6.11e-01 95.1% 75.5%
2044958 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 72.0 6.33e-01 95.6% 87.8%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 72.0 6.30e-01 95.1% 75.3%
1694889 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.79 64.0 6.09e-01 95.1% 73.1%
139106 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 72.0 6.69e-01 96.7% 81.9%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 71.0 6.41e-01 94.5% 80.3%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 72.0 6.15e-01 95.6% 74.0%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 71.0 6.37e-01 95.6% 77.3%
1867996 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 72.0 6.24e-01 95.6% 79.1%
2579093 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.78 71.0 6.48e-01 95.1% 76.6%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.78 71.0 6.42e-01 95.1% 79.4%
3075118 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 73.0 6.36e-01 97.8% 83.2%
4768609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 73.0 6.29e-01 97.8% 83.3%
143448 10.2.1.38 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N 0.77 65.0 6.84e-01 89.6% 97.0%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 70.0 6.42e-01 95.6% 80.0%
297441 10.2.1.19 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Bromo_coat 0.77 55.0 5.80e-01 92.3% 81.2%
2414126 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.77 70.0 6.26e-01 95.1% 74.3%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 69.0 6.23e-01 95.1% 73.0%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.76 50.0 5.89e-01 98.9% 93.1%
1405131 10.2.1.51 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.75 69.0 6.03e-01 96.7% 91.6%
2526957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 69.0 5.86e-01 97.8% 70.5%
1204 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.75 68.0 5.83e-01 97.8% 68.8%
152483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 68.0 5.86e-01 97.8% 69.6%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.74 67.0 5.94e-01 95.1% 75.5%
4935032 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 44.0 5.60e-01 89.1% 98.2%
148379 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.74 68.0 5.70e-01 97.8% 66.7%
3022795 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.74 65.0 4.78e-01 94.0% 69.8%
2884840 10.2.1.50 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.73 67.0 5.69e-01 97.8% 67.2%
2099165 10.2.1.22 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 0.73 65.0 5.15e-01 94.5% 67.9%
1219 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.73 68.0 6.80e-01 100.0% 98.9%
2710690 10.2.1.29 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.73 65.0 6.27e-01 94.0% 92.0%
1878989 10.2.1.29 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.72 64.0 6.20e-01 94.5% 96.1%
2117349 10.2.1.10 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat 0.72 56.0 5.55e-01 92.3% 77.0%
1106655 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.71 65.0 6.32e-01 98.4% 97.1%
2797580 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.71 48.0 5.18e-01 91.8% 79.1%
143449 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.70 62.0 6.30e-01 92.9% 96.0%
3254415 10.20.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.70 41.0 5.27e-01 96.7% 100.0%
1215 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.69 59.0 6.11e-01 93.4% 96.5%
5038393 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 49.0 5.58e-01 98.9% 100.0%
140026 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.67 60.0 5.30e-01 95.6% 70.8%
3212672 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.66 38.0 4.80e-01 86.9% 94.5%
379700 10.2.1.8 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Polyhedrin 0.61 50.0 4.76e-01 90.2% 73.2%
3282993 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.61 47.0 5.13e-01 98.9% 98.0%
3211142 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.60 36.0 4.42e-01 89.6% 94.8%
3969516 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.59 38.0 3.76e-01 100.0% 58.5%
3948941 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 44.0 4.69e-01 88.5% 96.8%
4940276 10.2.1.75 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 0.53 45.0 4.65e-01 92.3% 100.0%
5053199 10.1.2.184 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.53 44.0 4.24e-01 90.7% 99.5%
3248740 10.32.1.17 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase 0.52 44.0 4.54e-01 90.2% 95.9%
D2 high residues 236-308
PDB