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capsid_protein
Euk-VirQinghai_Himalayan_marmot_astrovirus_2
capsid_protein__YP_009345904__Qinghai_Himalayan_marmot_astrovirus_2__1961666
Identity
- Accession:
- YP_009345904 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
53.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Stellavirales›
Astroviridae›
Mamastrovirus›
Qinghai_Himalayan_marmot_astrovirus_2
TaxID: 1961666
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 69-252
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03115.21 best | Astro_capsid_N | 218.5 | 1.40e-64 | 96.7% | 72.7% |
D2
high
residues 257-388
Domain cluster:
rep: capsid_protein__NP_056788__Hepeviridae__291484__D322-442
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20751.3 best | SP2_M | 26.9 | 6.40e-06 | 81.1% | 60.3% |