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capsid_protein
Euk-VirFusarium_asiaticum_victorivirus_1
capsid_protein__YP_009552777__Fusarium_asiaticum_victorivirus_1__2268743
Identity
- Accession:
- YP_009552777 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
74.6
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Chrymotiviricetes›
Ghabrivirales›
Pseudototiviridae›
Victorivirus›
Fusarium_asiaticum_victorivirus_1
TaxID: 2268743
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 71-232_271-291
Domain cluster:
rep: coat_protein__YP_009212847__Penicillium_aurantiogriseum_totivirus_1__1755467__D82-115_136-208_280-306
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05518.18 best | Totivirus_coat | 218.7 | 1.70e-64 | 89.6% | 25.4% |
D2
high
residues 451-625
Domain cluster:
rep: coat_protein__YP_009182166__Ustilaginoidea_virens_RNA_virus_5__1756615__D455-595_610-622
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05518.18 best | Totivirus_coat | 242.5 | 1.00e-71 | 100.0% | 27.3% |
D3
medium
residues 57-70_233-270_292-307_361-400
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05518.18 best | Totivirus_coat | 73.1 | 2.00e-20 | 55.6% | 6.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3886268 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.54 | 32.0 | 3.28e-01 | 87.0% | 56.4% |
| 3962958 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.53 | 43.0 | 3.67e-01 | 87.0% | 76.5% |
| 3606968 | 5073.1.1.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M | 0.52 | 43.0 | 2.79e-01 | 94.4% | 79.5% |
| 3997386 | 4953.1.1.33 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › PF31020 | 0.51 | 40.0 | 3.94e-01 | 99.1% | 78.3% |
| 3227034 | 5069.1.3.65 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › PF31020 | 0.50 | 39.0 | 3.89e-01 | 99.1% | 79.1% |