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capsid_protein
Euk-VirAdeno-associated_virus
capsid_protein__YP_009552824__Adeno-associated_virus__272636
Identity
- Accession:
- YP_009552824 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
69.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Adeno-associated_virus
TaxID: 272636
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 235-424_614-658_671-691
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 245.7 | 1.20e-72 | 74.6% | 40.9% |
| PF00740.24 | VP1_2 | 78.1 | 7.90e-22 | 27.0% | 13.3% |
D2
medium
residues 52-144
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 117.4 | 3.70e-34 | 86.0% | 100.0% |