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capsid_protein
Euk-VirVombatid_gammaherpesvirus_1
capsid_protein__YP_010087434__Vombatid_gammaherpesvirus_1__2052651
Identity
- Accession:
- YP_010087434 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
61.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Manticavirus›
Vombatid_gammaherpesvirus_1
TaxID: 2052651
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-104
Domain cluster:
rep: ORF59__NP_733913__Callitrichine_gammaherpesvirus_3__106331__D15-79
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06112.17 best | Herpes_capsid | 42.0 | 1.60e-10 | 100.0% | 38.4% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wujA00 | 6.10.250.660 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.70 | 45.0 | 5.26e-01 | 71.8% | 94.0% |